data_5L3
#

_chem_comp.id                                   5L3
_chem_comp.name                                 "(6R)-5-O-acetyl-2,6-anhydro-6-{[4-(sulfamoyloxy)piperidin-1-yl]sulfonyl}-L-glucitol"
_chem_comp.type                                 D-saccharide
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C13 H24 N2 O11 S2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2015-10-16
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       448.466
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    5L3
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       4ZX1
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
5L3  C1   C1   C  0  1  N  N  R  -0.142   7.838  82.215  -1.513   0.027  -0.416  C1   5L3   1  
5L3  O2   O2   O  0  1  N  N  N   0.641   5.648  81.496  -3.689   0.615   0.510  O2   5L3   2  
5L3  C5   C5   C  0  1  N  N  R   1.436   9.026  83.709  -1.519  -2.094   0.704  C5   5L3   3  
5L3  CBI  CBI  C  0  1  N  N  N  -0.415   5.827  79.257  -5.609   1.892   1.390  CBI  5L3   4  
5L3  CBE  CBE  C  0  1  N  N  N   0.331   5.043  80.282  -4.866   1.212   0.269  CBE  5L3   5  
5L3  OBH  OBH  O  0  1  N  N  N   0.628   3.901  80.074  -5.331   1.206  -0.847  OBH  5L3   6  
5L3  C2   C2   C  0  1  N  N  R   1.031   7.083  81.656  -3.030  -0.020  -0.618  C2   5L3   7  
5L3  C3   C3   C  0  1  N  N  R   2.311   7.214  82.369  -3.478  -1.482  -0.716  C3   5L3   8  
5L3  O3   O3   O  0  1  N  N  N   3.020   5.900  82.357  -4.902  -1.538  -0.831  O3   5L3   9  
5L3  C4   C4   C  0  1  N  N  R   2.351   7.818  83.733  -3.036  -2.227   0.547  C4   5L3  10  
5L3  O4   O4   O  0  1  N  N  N   3.645   8.347  84.077  -3.386  -3.608   0.434  O4   5L3  11  
5L3  C6   C6   C  0  1  N  N  N   1.785  10.002  82.702  -0.824  -2.751  -0.490  C6   5L3  12  
5L3  O6   O6   O  0  1  N  N  N   0.735  10.361  81.802   0.591  -2.731  -0.287  O6   5L3  13  
5L3  O5   O5   O  0  1  N  N  N   0.111   8.341  83.522  -1.166  -0.710   0.758  O5   5L3  14  
5L3  SAG  SAG  S  0  1  N  N  N  -1.606   6.872  82.584  -0.981   1.751  -0.226  SAG  5L3  15  
5L3  OAH  OAH  O  0  1  N  N  N  -2.292   7.833  83.442  -1.139   2.459  -1.448  OAH  5L3  16  
5L3  OAJ  OAJ  O  0  1  N  N  N  -2.540   6.731  81.470  -1.460   2.289   0.999  OAJ  5L3  17  
5L3  NAB  NAB  N  0  1  N  N  N  -1.165   5.711  83.166   0.659   1.657  -0.018  NAB  5L3  18  
5L3  CAC  CAC  C  0  1  N  N  N  -1.510   4.445  82.579   1.564   1.702  -1.175  CAC  5L3  19  
5L3  CAD  CAD  C  0  1  N  N  N  -0.892   3.269  83.323   2.489   0.482  -1.124  CAD  5L3  20  
5L3  CAA  CAA  C  0  1  N  N  N  -0.962   5.799  84.603   1.237   1.534   1.327  CAA  5L3  21  
5L3  CAF  CAF  C  0  1  N  N  N  -1.288   4.549  85.393   2.165   0.315   1.355  CAF  5L3  22  
5L3  CAE  CAE  C  0  1  N  N  N  -0.728   3.403  84.754   3.201   0.442   0.230  CAE  5L3  23  
5L3  OAK  OAK  O  0  1  N  N  N  -1.639   2.402  85.350   4.089  -0.677   0.268  OAK  5L3  24  
5L3  SAL  SAL  S  0  1  N  N  N  -1.307   1.427  86.419   5.532  -0.335  -0.075  SAL  5L3  25  
5L3  OAN  OAN  O  0  1  N  N  N  -0.939   1.839  87.734   6.232  -1.569  -0.146  OAN  5L3  26  
5L3  OAO  OAO  O  0  1  N  N  N  -2.621   1.255  86.881   5.479   0.592  -1.151  OAO  5L3  27  
5L3  NAM  NAM  N  0  1  N  N  N  -1.026   0.021  85.952   6.161   0.486   1.219  NAM  5L3  28  
5L3  H1   H1   H  0  1  N  N  N  -0.449   8.638  81.525  -1.017  -0.413  -1.281  H1   5L3  29  
5L3  H5   H2   H  0  1  N  N  N   1.453   9.499  84.702  -1.205  -2.586   1.624  H5   5L3  30  
5L3  H3A  H3   H  0  1  N  N  N  -0.605   5.194  78.378  -5.040   1.795   2.314  H3A  5L3  31  
5L3  H4A  H4   H  0  1  N  N  N  -1.373   6.165  79.680  -5.739   2.948   1.152  H4A  5L3  32  
5L3  H5A  H5   H  0  1  N  N  N   0.182   6.701  78.958  -6.586   1.425   1.514  H5A  5L3  33  
5L3  H2   H6   H  0  1  N  N  N   1.194   7.475  80.641  -3.291   0.505  -1.536  H2   5L3  34  
5L3  H3   H7   H  0  1  N  N  N   2.926   7.877  81.743  -3.023  -1.944  -1.592  H3   5L3  35  
5L3  HO3  H8   H  0  1  N  Y  N   3.847   5.982  82.817  -5.256  -2.435  -0.898  HO3  5L3  36  
5L3  H4   H9   H  0  1  N  N  N   2.003   7.094  84.485  -3.532  -1.794   1.416  H4   5L3  37  
5L3  HO4  H10  H  0  1  N  Y  N   4.278   7.639  84.111  -3.131  -4.142   1.199  HO4  5L3  38  
5L3  H61  H11  H  0  1  N  N  N   2.117  10.916  83.217  -1.162  -3.783  -0.585  H61  5L3  39  
5L3  H62  H12  H  0  1  N  N  N   2.616   9.593  82.108  -1.068  -2.203  -1.400  H62  5L3  40  
5L3  HO6  H13  H  0  1  N  Y  N   1.056  11.003  81.180   1.097  -3.132  -1.007  HO6  5L3  41  
5L3  H16  H16  H  0  1  N  N  N  -2.604   4.336  82.594   0.982   1.681  -2.096  H16  5L3  42  
5L3  H17  H17  H  0  1  N  N  N  -1.154   4.430  81.538   2.160   2.614  -1.137  H17  5L3  43  
5L3  H18  H18  H  0  1  N  N  N  -1.531   2.392  83.144   1.901  -0.427  -1.253  H18  5L3  44  
5L3  H19  H19  H  0  1  N  N  N   0.104   3.091  82.891   3.228   0.552  -1.922  H19  5L3  45  
5L3  H20  H20  H  0  1  N  N  N   0.096   6.044  84.780   1.807   2.432   1.564  H20  5L3  46  
5L3  H21  H21  H  0  1  N  N  N  -0.870   4.640  86.407   2.674   0.268   2.318  H21  5L3  47  
5L3  H22  H22  H  0  1  N  N  N  -2.380   4.433  85.455   1.579  -0.592   1.208  H22  5L3  48  
5L3  H23  H23  H  0  1  N  N  N   0.313   3.227  85.062   3.770   1.361   0.368  H23  5L3  49  
5L3  H24  H24  H  0  1  N  N  N  -0.814  -0.557  86.740   7.119   0.482   1.376  H24  5L3  50  
5L3  H25  H25  H  0  1  N  N  N  -1.830  -0.341  85.481   5.573   0.970   1.819  H25  5L3  51  
5L3  H14  H14  H  0  1  N  N  N  -1.595   6.614  84.984   0.439   1.402   2.057  H14  5L3  52  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
5L3  C1   C2   SING  N  N   1  
5L3  C1   O5   SING  N  N   2  
5L3  C1   SAG  SING  N  N   3  
5L3  O2   CBE  SING  N  N   4  
5L3  O2   C2   SING  N  N   5  
5L3  C5   C4   SING  N  N   6  
5L3  C5   C6   SING  N  N   7  
5L3  C5   O5   SING  N  N   8  
5L3  CBI  CBE  SING  N  N   9  
5L3  CBE  OBH  DOUB  N  N  10  
5L3  C2   C3   SING  N  N  11  
5L3  C3   O3   SING  N  N  12  
5L3  C3   C4   SING  N  N  13  
5L3  C4   O4   SING  N  N  14  
5L3  C6   O6   SING  N  N  15  
5L3  SAG  OAH  DOUB  N  N  16  
5L3  SAG  OAJ  DOUB  N  N  17  
5L3  SAG  NAB  SING  N  N  18  
5L3  NAB  CAC  SING  N  N  19  
5L3  NAB  CAA  SING  N  N  20  
5L3  CAC  CAD  SING  N  N  21  
5L3  CAD  CAE  SING  N  N  22  
5L3  CAA  CAF  SING  N  N  23  
5L3  CAF  CAE  SING  N  N  24  
5L3  CAE  OAK  SING  N  N  25  
5L3  OAK  SAL  SING  N  N  26  
5L3  SAL  OAN  DOUB  N  N  27  
5L3  SAL  OAO  DOUB  N  N  28  
5L3  SAL  NAM  SING  N  N  29  
5L3  C1   H1   SING  N  N  30  
5L3  C5   H5   SING  N  N  31  
5L3  CBI  H3A  SING  N  N  32  
5L3  CBI  H4A  SING  N  N  33  
5L3  CBI  H5A  SING  N  N  34  
5L3  C2   H2   SING  N  N  35  
5L3  C3   H3   SING  N  N  36  
5L3  O3   HO3  SING  N  N  37  
5L3  C4   H4   SING  N  N  38  
5L3  O4   HO4  SING  N  N  39  
5L3  C6   H61  SING  N  N  40  
5L3  C6   H62  SING  N  N  41  
5L3  O6   HO6  SING  N  N  42  
5L3  CAC  H16  SING  N  N  43  
5L3  CAC  H17  SING  N  N  44  
5L3  CAD  H18  SING  N  N  45  
5L3  CAD  H19  SING  N  N  46  
5L3  CAA  H20  SING  N  N  47  
5L3  CAF  H21  SING  N  N  48  
5L3  CAF  H22  SING  N  N  49  
5L3  CAE  H23  SING  N  N  50  
5L3  NAM  H24  SING  N  N  51  
5L3  NAM  H25  SING  N  N  52  
5L3  CAA  H14  SING  N  N  53  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
5L3  SMILES            ACDLabs               12.01  "C1(C(OC(C)=O)C(O)C(C(CO)O1)O)S(=O)(=O)N2CCC(CC2)OS(=O)(=O)N"  
5L3  InChI             InChI                 1.03   "InChI=1S/C13H24N2O11S2/c1-7(17)24-12-11(19)10(18)9(6-16)25-13(12)27(20,21)15-4-2-8(3-5-15)26-28(14,22)23/h8-13,16,18-19H,2-6H2,1H3,(H2,14,22,23)/t9-,10+,11-,12-,13-/m1/s1"  
5L3  InChIKey          InChI                 1.03   YXPKUHUEEVWRKJ-NZEXEKPDSA-N  
5L3  SMILES_CANONICAL  CACTVS                3.385  "CC(=O)O[C@@H]1[C@H](O)[C@@H](O)[C@@H](CO)O[C@@H]1[S](=O)(=O)N2CC[C@@H](CC2)O[S](N)(=O)=O"  
5L3  SMILES            CACTVS                3.385  "CC(=O)O[CH]1[CH](O)[CH](O)[CH](CO)O[CH]1[S](=O)(=O)N2CC[CH](CC2)O[S](N)(=O)=O"  
5L3  SMILES_CANONICAL  "OpenEye OEToolkits"  1.9.2  "CC(=O)O[C@@H]1[C@@H]([C@H]([C@H](O[C@@H]1S(=O)(=O)N2CCC(CC2)OS(=O)(=O)N)CO)O)O"  
5L3  SMILES            "OpenEye OEToolkits"  1.9.2  "CC(=O)OC1C(C(C(OC1S(=O)(=O)N2CCC(CC2)OS(=O)(=O)N)CO)O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
5L3  "SYSTEMATIC NAME"  ACDLabs               12.01  "(6R)-5-O-acetyl-2,6-anhydro-6-{[4-(sulfamoyloxy)piperidin-1-yl]sulfonyl}-L-glucitol"  
5L3  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.9.2  "[(2R,3R,4R,5R,6R)-6-(hydroxymethyl)-4,5-bis(oxidanyl)-2-(4-sulfamoyloxypiperidin-1-yl)sulfonyl-oxan-3-yl] ethanoate"  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
5L3  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
5L3  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
5L3  "CARBOHYDRATE ANOMER"                  alpha     PDB  ?  
5L3  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
5L3  "Create component"          2015-10-16  RCSB  
5L3  "Initial release"           2015-10-28  RCSB  
5L3  "Other modification"        2020-07-03  RCSB  
5L3  "Modify internal type"      2020-07-17  RCSB  
5L3  "Modify linking type"       2020-07-17  RCSB  
5L3  "Modify atom id"            2020-07-17  RCSB  
5L3  "Modify component atom id"  2020-07-17  RCSB  
5L3  "Modify leaving atom flag"  2020-07-17  RCSB  
##
