data_3T3
#

_chem_comp.id                                   3T3
_chem_comp.name                                 "[(amino-kappaN)methanethiolato](3-fluoro-9-hydroxypyrido[2,3-a]pyrrolo[3,4-c]carbazole-5,7(6H,12H)-dionato-kappa~2~N,N')(1,4,7-trithionane-kappa~3~S~1~,S~4~,S~7~)ruthenium"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C24 H22 F N4 O3 Ru S4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "(3-fluoro-9-methoxypyrido[2,3-a]pyrrolo[3,4-c]carbazole-5,7(6H,12H)-dionato)(1,4,7-trithiacyclodecan)ruthenium(II)-isothiocyanate; EM5"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2014-12-21
_chem_comp.pdbx_modified_date                   2021-03-13
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       662.785
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    3T3
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  Y
_chem_comp.pdbx_model_coordinates_db_code       4RLO
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
3T3  C6   C6   C   0  1  N  N  N  82.510   3.805   8.800  ?  ?  ?  C6   3T3   1  
3T3  S8   S8   S   0  1  N  N  N  86.482   2.516   5.852  ?  ?  ?  S8   3T3   2  
3T3  C21  C21  C   0  1  Y  N  N  81.087   0.418   4.096  ?  ?  ?  C21  3T3   3  
3T3  C22  C22  C   0  1  Y  N  N  79.798   2.069   4.192  ?  ?  ?  C22  3T3   4  
3T3  C23  C23  C   0  1  Y  N  N  79.049   3.219   4.448  ?  ?  ?  C23  3T3   5  
3T3  C25  C25  C   0  1  Y  N  N  77.675   2.895   2.482  ?  ?  ?  C25  3T3   6  
3T3  O1   O1   O   0  1  N  N  N  78.881  -0.815   0.235  ?  ?  ?  O1   3T3   7  
3T3  O2   O2   O   0  1  N  N  N  82.091  -3.624   1.276  ?  ?  ?  O2   3T3   8  
3T3  O3   O3   O   0  1  N  N  N  76.650   3.306   1.669  ?  ?  ?  O3   3T3   9  
3T3  C5   C5   C   0  1  N  N  N  81.614  -0.814   8.682  ?  ?  ?  C5   3T3  10  
3T3  C7   C7   C   0  1  N  N  N  83.494   2.768   9.378  ?  ?  ?  C7   3T3  11  
3T3  C9   C9   C   0  1  N  N  N  84.719   2.578   5.703  ?  ?  ?  C9   3T3  12  
3T3  S10  S10  S   0  1  N  N  N  80.384  -0.047   7.489  ?  ?  ?  S10  3T3  13  
3T3  C11  C11  C   0  1  N  N  N  79.674   2.633   8.498  ?  ?  ?  C11  3T3  14  
3T3  N12  N12  N   0  1  N  N  N  83.432   2.573   5.636  ?  ?  ?  N12  3T3  15  
3T3  S13  S13  S   0  1  N  N  N  81.121   3.351   7.670  ?  ?  ?  S13  3T3  16  
3T3  S14  S14  S   0  1  N  N  N  83.753   1.172   8.494  ?  ?  ?  S14  3T3  17  
3T3  C15  C15  C   0  1  N  N  N  79.763   1.143   8.771  ?  ?  ?  C15  3T3  18  
3T3  C16  C16  C   0  1  N  N  N  82.673   0.019   9.442  ?  ?  ?  C16  3T3  19  
3T3  N18  N18  N   0  1  Y  N  N  80.848   1.519   4.882  ?  ?  ?  N18  3T3  20  
3T3  N19  N19  N   0  1  N  N  N  80.408  -2.350   0.536  ?  ?  ?  N19  3T3  21  
3T3  N20  N20  N   0  1  Y  N  N  82.876  -0.238   5.560  ?  ?  ?  N20  3T3  22  
3T3  C24  C24  C   0  1  Y  N  N  77.996   3.639   3.605  ?  ?  ?  C24  3T3  23  
3T3  C26  C26  C   0  1  Y  N  N  78.410   1.721   2.191  ?  ?  ?  C26  3T3  24  
3T3  C27  C27  C   0  1  Y  N  N  79.447   1.354   3.062  ?  ?  ?  C27  3T3  25  
3T3  C28  C28  C   0  1  Y  N  N  80.305   0.271   3.000  ?  ?  ?  C28  3T3  26  
3T3  C29  C29  C   0  1  Y  N  N  80.433  -0.797   2.104  ?  ?  ?  C29  3T3  27  
3T3  C30  C30  C   0  1  N  N  N  79.802  -1.235   0.916  ?  ?  ?  C30  3T3  28  
3T3  C31  C31  C   0  1  N  N  N  81.390  -2.649   1.406  ?  ?  ?  C31  3T3  29  
3T3  C32  C32  C   0  1  Y  N  N  81.462  -1.709   2.423  ?  ?  ?  C32  3T3  30  
3T3  C33  C33  C   0  1  Y  N  N  82.291  -1.554   3.570  ?  ?  ?  C33  3T3  31  
3T3  C34  C34  C   0  1  Y  N  N  83.297  -2.484   3.852  ?  ?  ?  C34  3T3  32  
3T3  C35  C35  C   0  1  Y  N  N  84.070  -2.246   5.018  ?  ?  ?  C35  3T3  33  
3T3  C36  C36  C   0  1  Y  N  N  83.835  -1.118   5.858  ?  ?  ?  C36  3T3  34  
3T3  C37  C37  C   0  1  Y  N  N  82.120  -0.487   4.426  ?  ?  ?  C37  3T3  35  
3T3  F4   F4   F   0  1  N  N  N  85.044  -3.135   5.292  ?  ?  ?  F4   3T3  36  
3T3  RU   RU   RU  0  0  N  N  N  82.161   1.423   6.475  ?  ?  ?  RU   3T3  37  
3T3  H1   H1   H   0  1  N  N  N  83.125   4.532   8.248  ?  ?  ?  H1   3T3  38  
3T3  H2   H2   H   0  1  N  N  N  82.047   4.299   9.667  ?  ?  ?  H2   3T3  39  
3T3  H3   H3   H   0  1  N  N  N  86.854   3.484   5.068  ?  ?  ?  H3   3T3  40  
3T3  H4   H4   H   0  1  N  N  N  79.283   3.809   5.322  ?  ?  ?  H4   3T3  41  
3T3  H5   H5   H   0  1  N  N  N  76.273   4.106   2.015  ?  ?  ?  H5   3T3  42  
3T3  H6   H6   H   0  1  N  N  N  81.015  -1.321   9.453  ?  ?  ?  H6   3T3  43  
3T3  H7   H7   H   0  1  N  N  N  82.174  -1.562   8.102  ?  ?  ?  H7   3T3  44  
3T3  H8   H8   H   0  1  N  N  N  83.140   2.520  10.389  ?  ?  ?  H8   3T3  45  
3T3  H9   H9   H   0  1  N  N  N  84.476   3.260   9.444  ?  ?  ?  H9   3T3  46  
3T3  H10  H10  H   0  1  N  N  N  84.792   2.493   4.609  ?  ?  ?  H10  3T3  47  
3T3  H11  H11  H   0  1  N  N  N  84.716   3.640   5.989  ?  ?  ?  H11  3T3  48  
3T3  H12  H12  H   0  1  N  N  N  79.541   3.149   9.461  ?  ?  ?  H12  3T3  49  
3T3  H13  H13  H   0  1  N  N  N  78.794   2.811   7.862  ?  ?  ?  H13  3T3  50  
3T3  H15  H15  H   0  1  N  N  N  78.746   0.815   9.031  ?  ?  ?  H15  3T3  51  
3T3  H16  H16  H   0  1  N  N  N  80.421   1.027   9.645  ?  ?  ?  H16  3T3  52  
3T3  H17  H17  H   0  1  N  N  N  83.335  -0.693   9.956  ?  ?  ?  H17  3T3  53  
3T3  H18  H18  H   0  1  N  N  N  82.134   0.622  10.188  ?  ?  ?  H18  3T3  54  
3T3  H19  H19  H   0  1  N  N  N  80.172  -2.887  -0.274  ?  ?  ?  H19  3T3  55  
3T3  H20  H20  H   0  1  N  N  N  77.443   4.538   3.836  ?  ?  ?  H20  3T3  56  
3T3  H21  H21  H   0  1  N  N  N  78.179   1.123   1.322  ?  ?  ?  H21  3T3  57  
3T3  H22  H22  H   0  1  N  N  N  83.476  -3.338   3.216  ?  ?  ?  H22  3T3  58  
3T3  H23  H23  H   0  1  N  N  N  84.438  -0.974   6.743  ?  ?  ?  H23  3T3  59  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
3T3  O1   C30  DOUB  N  N   1  
3T3  N19  C30  SING  N  N   2  
3T3  N19  C31  SING  N  N   3  
3T3  C30  C29  SING  N  N   4  
3T3  O2   C31  DOUB  N  N   5  
3T3  C31  C32  SING  N  N   6  
3T3  O3   C25  SING  N  N   7  
3T3  C29  C32  DOUB  Y  N   8  
3T3  C29  C28  SING  Y  N   9  
3T3  C26  C25  DOUB  Y  N  10  
3T3  C26  C27  SING  Y  N  11  
3T3  C32  C33  SING  Y  N  12  
3T3  C25  C24  SING  Y  N  13  
3T3  C28  C27  SING  Y  N  14  
3T3  C28  C21  DOUB  Y  N  15  
3T3  C27  C22  DOUB  Y  N  16  
3T3  C33  C34  DOUB  Y  N  17  
3T3  C33  C37  SING  Y  N  18  
3T3  C24  C23  DOUB  Y  N  19  
3T3  C34  C35  SING  Y  N  20  
3T3  C21  C37  SING  Y  N  21  
3T3  C21  N18  SING  Y  N  22  
3T3  C22  C23  SING  Y  N  23  
3T3  C22  N18  SING  Y  N  24  
3T3  C37  N20  DOUB  Y  N  25  
3T3  N18  RU   SING  N  N  26  
3T3  C35  F4   SING  N  N  27  
3T3  C35  C36  DOUB  Y  N  28  
3T3  N20  C36  SING  Y  N  29  
3T3  N20  RU   SING  N  N  30  
3T3  N12  C9   SING  N  N  31  
3T3  N12  RU   SING  N  N  32  
3T3  C9   S8   SING  N  N  33  
3T3  RU   S10  SING  N  N  34  
3T3  RU   S13  SING  N  N  35  
3T3  RU   S14  SING  N  N  36  
3T3  S10  C5   SING  N  N  37  
3T3  S10  C15  SING  N  N  38  
3T3  S13  C11  SING  N  N  39  
3T3  S13  C6   SING  N  N  40  
3T3  S14  C7   SING  N  N  41  
3T3  S14  C16  SING  N  N  42  
3T3  C11  C15  SING  N  N  43  
3T3  C5   C16  SING  N  N  44  
3T3  C6   C7   SING  N  N  45  
3T3  C6   H1   SING  N  N  46  
3T3  C6   H2   SING  N  N  47  
3T3  S8   H3   SING  N  N  48  
3T3  C23  H4   SING  N  N  49  
3T3  O3   H5   SING  N  N  50  
3T3  C5   H6   SING  N  N  51  
3T3  C5   H7   SING  N  N  52  
3T3  C7   H8   SING  N  N  53  
3T3  C7   H9   SING  N  N  54  
3T3  C9   H10  SING  N  N  55  
3T3  C9   H11  SING  N  N  56  
3T3  C11  H12  SING  N  N  57  
3T3  C11  H13  SING  N  N  58  
3T3  C15  H15  SING  N  N  59  
3T3  C15  H16  SING  N  N  60  
3T3  C16  H17  SING  N  N  61  
3T3  C16  H18  SING  N  N  62  
3T3  N19  H19  SING  N  N  63  
3T3  C24  H20  SING  N  N  64  
3T3  C26  H21  SING  N  N  65  
3T3  C34  H22  SING  N  N  66  
3T3  C36  H23  SING  N  N  67  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
3T3  SMILES            ACDLabs               12.01  "O=C1c3c(C(=O)N1)c2cc(F)cn9c2c5c3c4cc(O)ccc4n5[Ru]798(NCS)S6CCS8CCS7CC6"  
3T3  InChI             InChI                 1.03   "InChI=1S/C17H8FN3O3.C6H12S3.CH4NS.Ru/c18-6-3-9-12-13(17(24)21-16(12)23)11-8-4-7(22)1-2-10(8)20-15(11)14(9)19-5-6;1-2-8-5-6-9-4-3-7-1;2-1-3;/h1-5H,(H3,19,20,21,22,23,24);1-6H2;2-3H,1H2;/q;;-1;+2/p-1"  
3T3  InChIKey          InChI                 1.03   KMFJAEIVUNKAGT-UHFFFAOYSA-M  
3T3  SMILES_CANONICAL  CACTVS                3.385  "N(|[Ru]|1|23(|S4CCS|1CCS|2CC4)|n5cc(F)cc6c5c7n3c8ccc(O)cc8c7c9C(=O)NC(=O)c69)CS"  
3T3  SMILES            CACTVS                3.385  "N(|[Ru]|1|23(|S4CCS|1CCS|2CC4)|n5cc(F)cc6c5c7n3c8ccc(O)cc8c7c9C(=O)NC(=O)c69)CS"  
3T3  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.6  "c1cc2c(cc1O)c3c4n2[Ru]56([N]7=C4C(=CC(=C7)F)C8=C3C(=O)NC8=O)([S]9CC[S]5CC[S]6CC9)[N]CS"  
3T3  SMILES            "OpenEye OEToolkits"  1.7.6  "c1cc2c(cc1O)c3c4n2[Ru]56([N]7=C4C(=CC(=C7)F)C8=C3C(=O)NC8=O)([S]9CC[S]5CC[S]6CC9)[N]CS"  
#
_pdbx_chem_comp_identifier.comp_id          3T3
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          ACDLabs
_pdbx_chem_comp_identifier.program_version  12.01
_pdbx_chem_comp_identifier.identifier       "[(amino-kappaN)methanethiolato](3-fluoro-9-hydroxypyrido[2,3-a]pyrrolo[3,4-c]carbazole-5,7(6H,12H)-dionato-kappa~2~N,N')(1,4,7-trithionane-kappa~3~S~1~,S~4~,S~7~)ruthenium"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
3T3  "Create component"  2014-12-21  RCSB  
3T3  "Initial release"   2015-01-21  RCSB  
3T3  "Modify synonyms"   2021-03-13  RCSB  
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  3T3  "(3-fluoro-9-methoxypyrido[2,3-a]pyrrolo[3,4-c]carbazole-5,7(6H,12H)-dionato)(1,4,7-trithiacyclodecan)ruthenium(II)-isothiocyanate"  PDB  ?  
2  3T3  EM5                                                                                                                                  PDB  ?  
##
