data_JN2
#

_chem_comp.id                                   JN2
_chem_comp.name                                 "3-(4-fluorophenyl)-~{N}-[(2~{R},3~{R},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]benzamide"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C19 H20 F N O6"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-03-13
_chem_comp.pdbx_modified_date                   2019-04-05
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       377.364
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    JN2
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6R0H
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
JN2  C2     C1   C  0  1  N  N  N  34.656  23.840  29.615  -0.289   0.213   0.133  C2     JN2   1  
JN2  C4     C2   C  0  1  Y  N  N  37.148  23.728  30.057   0.950   1.809  -1.324  C4     JN2   2  
JN2  C3     C3   C  0  1  Y  N  N  35.871  24.170  30.443   0.975   0.752  -0.412  C3     JN2   3  
JN2  C9     C4   C  0  1  Y  N  N  36.738  25.966  33.703   4.683   0.142  -0.119  C9     JN2   4  
JN2  C8     C5   C  0  1  Y  N  N  35.735  24.908  31.635   2.196   0.206  -0.018  C8     JN2   5  
JN2  C13    C6   C  0  1  Y  N  N  37.671  27.429  35.382   7.080   0.113  -0.252  C13    JN2   6  
JN2  C14    C7   C  0  1  Y  N  N  37.800  26.742  34.180   5.871   0.655  -0.637  C14    JN2   7  
JN2  C7     C8   C  0  1  Y  N  N  36.865  25.203  32.419   3.380   0.718  -0.535  C7     JN2   8  
JN2  C6     C9   C  0  1  Y  N  N  38.128  24.741  32.014   3.342   1.774  -1.445  C6     JN2   9  
JN2  C10    C10  C  0  1  Y  N  N  35.562  25.883  34.461   4.722  -0.916   0.786  C10    JN2  10  
JN2  C12    C11  C  0  1  Y  N  N  36.492  27.349  36.124   7.114  -0.939   0.648  C12    JN2  11  
JN2  C11    C12  C  0  1  Y  N  N  35.443  26.575  35.656   5.936  -1.452   1.166  C11    JN2  12  
JN2  C5     C13  C  0  1  Y  N  N  38.273  24.008  30.842   2.131   2.312  -1.834  C5     JN2  13  
JN2  "O2'"  O1   O  0  1  N  N  N  33.957  24.510  25.968  -3.233   2.283   1.402  "O2'"  JN2  14  
JN2  "C2'"  C14  C  0  1  N  N  R  33.878  23.085  26.150  -3.732   1.338   0.454  "C2'"  JN2  15  
JN2  "C3'"  C15  C  0  1  N  N  S  32.733  22.478  25.315  -5.058   0.760   0.957  "C3'"  JN2  16  
JN2  "O3'"  O2   O  0  1  N  N  N  32.992  22.513  23.899  -6.030   1.803   1.050  "O3'"  JN2  17  
JN2  "C4'"  C16  C  0  1  N  N  S  32.444  21.032  25.747  -5.544  -0.308  -0.029  "C4'"  JN2  18  
JN2  "O4'"  O3   O  0  1  N  N  N  31.238  20.619  25.078  -6.744  -0.905   0.468  "O4'"  JN2  19  
JN2  "C5'"  C17  C  0  1  N  N  R  32.340  20.863  27.293  -4.463  -1.380  -0.181  "C5'"  JN2  20  
JN2  "C6'"  C18  C  0  1  N  N  N  32.165  19.406  27.716  -4.916  -2.419  -1.209  "C6'"  JN2  21  
JN2  "O6'"  O4   O  0  1  N  N  N  33.176  18.564  27.144  -3.961  -3.480  -1.267  "O6'"  JN2  22  
JN2  "O5'"  O5   O  0  1  N  N  N  33.490  21.403  27.970  -3.248  -0.771  -0.622  "O5'"  JN2  23  
JN2  "C1'"  C19  C  0  1  N  N  R  33.668  22.806  27.651  -2.721   0.201   0.282  "C1'"  JN2  24  
JN2  N1     N1   N  0  1  N  N  N  34.809  23.327  28.392  -1.468   0.739  -0.254  N1     JN2  25  
JN2  F15    F1   F  0  1  N  N  N  36.370  28.026  37.288   8.300  -1.466   1.023  F15    JN2  26  
JN2  O2     O6   O  0  1  N  N  N  33.525  23.969  30.084  -0.265  -0.707   0.927  O2     JN2  27  
JN2  H1     H1   H  0  1  N  N  N  37.263  23.165  29.143   0.006   2.230  -1.635  H1     JN2  28  
JN2  H2     H2   H  0  1  N  N  N  34.759  25.249  31.948   2.221  -0.612   0.688  H2     JN2  29  
JN2  H3     H3   H  0  1  N  N  N  38.491  28.030  35.745   8.001   0.510  -0.654  H3     JN2  30  
JN2  H4     H4   H  0  1  N  N  N  38.718  26.807  33.616   5.845   1.476  -1.339  H4     JN2  31  
JN2  H5     H5   H  0  1  N  N  N  38.996  24.958  32.620   4.262   2.173  -1.847  H5     JN2  32  
JN2  H6     H6   H  0  1  N  N  N  34.741  25.274  34.111   3.804  -1.316   1.190  H6     JN2  33  
JN2  H7     H7   H  0  1  N  N  N  34.527  26.510  36.225   5.967  -2.273   1.867  H7     JN2  34  
JN2  H8     H8   H  0  1  N  N  N  39.248  23.656  30.539   2.106   3.130  -2.539  H8     JN2  35  
JN2  H9     H9   H  0  1  N  N  N  34.669  24.858  26.492  -2.391   2.687   1.149  H9     JN2  36  
JN2  H10    H10  H  0  1  N  N  N  34.823  22.616  25.838  -3.890   1.832  -0.505  H10    JN2  37  
JN2  H11    H11  H  0  1  N  N  N  31.829  23.069  25.521  -4.910   0.309   1.939  H11    JN2  38  
JN2  H12    H12  H  0  1  N  N  N  33.171  23.407  23.631  -5.787   2.514   1.658  H12    JN2  39  
JN2  H13    H13  H  0  1  N  N  N  33.279  20.405  25.401  -5.740   0.153  -0.997  H13    JN2  40  
JN2  H14    H14  H  0  1  N  N  N  31.029  19.725  25.324  -7.471  -0.281   0.594  H14    JN2  41  
JN2  H15    H15  H  0  1  N  N  N  31.446  21.414  27.621  -4.297  -1.868   0.780  H15    JN2  42  
JN2  H16    H16  H  0  1  N  N  N  31.177  19.054  27.383  -5.887  -2.819  -0.918  H16    JN2  43  
JN2  H17    H17  H  0  1  N  N  N  32.227  19.343  28.812  -4.996  -1.949  -2.190  H17    JN2  44  
JN2  H18    H18  H  0  1  N  N  N  33.039  17.667  27.426  -4.184  -4.176  -1.900  H18    JN2  45  
JN2  H19    H19  H  0  1  N  N  N  32.768  23.354  27.966  -2.532  -0.266   1.249  H19    JN2  46  
JN2  H20    H20  H  0  1  N  N  N  35.719  23.300  27.979  -1.487   1.474  -0.887  H20    JN2  47  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
JN2  "O3'"  "C3'"  SING  N  N   1  
JN2  "O4'"  "C4'"  SING  N  N   2  
JN2  "C3'"  "C4'"  SING  N  N   3  
JN2  "C3'"  "C2'"  SING  N  N   4  
JN2  "C4'"  "C5'"  SING  N  N   5  
JN2  "O2'"  "C2'"  SING  N  N   6  
JN2  "C2'"  "C1'"  SING  N  N   7  
JN2  "O6'"  "C6'"  SING  N  N   8  
JN2  "C5'"  "C6'"  SING  N  N   9  
JN2  "C5'"  "O5'"  SING  N  N  10  
JN2  "C1'"  "O5'"  SING  N  N  11  
JN2  "C1'"  N1     SING  N  N  12  
JN2  N1     C2     SING  N  N  13  
JN2  C2     O2     DOUB  N  N  14  
JN2  C2     C3     SING  N  N  15  
JN2  C4     C3     DOUB  Y  N  16  
JN2  C4     C5     SING  Y  N  17  
JN2  C3     C8     SING  Y  N  18  
JN2  C5     C6     DOUB  Y  N  19  
JN2  C8     C7     DOUB  Y  N  20  
JN2  C6     C7     SING  Y  N  21  
JN2  C7     C9     SING  N  N  22  
JN2  C9     C14    DOUB  Y  N  23  
JN2  C9     C10    SING  Y  N  24  
JN2  C14    C13    SING  Y  N  25  
JN2  C10    C11    DOUB  Y  N  26  
JN2  C13    C12    DOUB  Y  N  27  
JN2  C11    C12    SING  Y  N  28  
JN2  C12    F15    SING  N  N  29  
JN2  C4     H1     SING  N  N  30  
JN2  C8     H2     SING  N  N  31  
JN2  C13    H3     SING  N  N  32  
JN2  C14    H4     SING  N  N  33  
JN2  C6     H5     SING  N  N  34  
JN2  C10    H6     SING  N  N  35  
JN2  C11    H7     SING  N  N  36  
JN2  C5     H8     SING  N  N  37  
JN2  "O2'"  H9     SING  N  N  38  
JN2  "C2'"  H10    SING  N  N  39  
JN2  "C3'"  H11    SING  N  N  40  
JN2  "O3'"  H12    SING  N  N  41  
JN2  "C4'"  H13    SING  N  N  42  
JN2  "O4'"  H14    SING  N  N  43  
JN2  "C5'"  H15    SING  N  N  44  
JN2  "C6'"  H16    SING  N  N  45  
JN2  "C6'"  H17    SING  N  N  46  
JN2  "O6'"  H18    SING  N  N  47  
JN2  "C1'"  H19    SING  N  N  48  
JN2  N1     H20    SING  N  N  49  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
JN2  InChI             InChI                 1.03   "InChI=1S/C19H20FNO6/c20-13-6-4-10(5-7-13)11-2-1-3-12(8-11)18(26)21-19-17(25)16(24)15(23)14(9-22)27-19/h1-8,14-17,19,22-25H,9H2,(H,21,26)/t14-,15-,16+,17-,19-/m1/s1"  
JN2  InChIKey          InChI                 1.03   ZNFXGMNTWYBCJQ-OGJJZOIMSA-N  
JN2  SMILES_CANONICAL  CACTVS                3.385  "OC[C@H]1O[C@@H](NC(=O)c2cccc(c2)c3ccc(F)cc3)[C@H](O)[C@@H](O)[C@@H]1O"  
JN2  SMILES            CACTVS                3.385  "OC[CH]1O[CH](NC(=O)c2cccc(c2)c3ccc(F)cc3)[CH](O)[CH](O)[CH]1O"  
JN2  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1cc(cc(c1)C(=O)N[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)O)c3ccc(cc3)F"  
JN2  SMILES            "OpenEye OEToolkits"  2.0.7  "c1cc(cc(c1)C(=O)NC2C(C(C(C(O2)CO)O)O)O)c3ccc(cc3)F"  
#
_pdbx_chem_comp_identifier.comp_id          JN2
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "3-(4-fluorophenyl)-~{N}-[(2~{R},3~{R},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]benzamide"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
JN2  "Create component"  2019-03-13  RCSB  
JN2  "Initial release"   2019-04-10  RCSB  
##
