data_JL2
#

_chem_comp.id                                   JL2
_chem_comp.name                                 "3-[3-[2-[(3,4,5-trimethoxyphenyl)amino]pyrrolo[2,3-d]pyrimidin-7-yl]phenyl]propanenitrile"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C24 H23 N5 O3"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-03-08
_chem_comp.pdbx_modified_date                   2019-04-12
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       429.471
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    JL2
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6QY9
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
JL2  C4   C1   C  0  1  Y  N  N  22.479   -9.239  120.144    2.998  -0.712  -0.257  C4   JL2   1  
JL2  C14  C2   C  0  1  Y  N  N  18.289   -6.857  119.245   -3.376  -0.315  -1.727  C14  JL2   2  
JL2  C5   C3   C  0  1  Y  N  N  22.188   -8.052  119.496    3.588   0.516  -0.524  C5   JL2   3  
JL2  C6   C4   C  0  1  Y  N  N  23.038   -6.964  119.648    4.964   0.660  -0.435  C6   JL2   4  
JL2  C11  C5   C  0  1  Y  N  N  16.354   -9.790  117.993   -3.050   2.491   0.463  C11  JL2   5  
JL2  C7   C6   C  0  1  Y  N  N  20.437  -10.620  119.538    0.777   0.200  -0.021  C7   JL2   6  
JL2  C8   C7   C  0  1  Y  N  N  18.449   -9.868  118.791   -1.352   1.069   0.082  C8   JL2   7  
JL2  C9   C8   C  0  1  Y  N  N  18.002  -11.173  118.605   -0.814   2.251   0.632  C9   JL2   8  
JL2  C10  C9   C  0  1  Y  N  N  18.864  -12.187  118.946    0.564   2.334   0.830  C10  JL2   9  
JL2  C12  C10  C  0  1  Y  N  N  16.656  -11.095  118.101   -1.949   3.146   0.863  C12  JL2  10  
JL2  C13  C11  C  0  1  Y  N  N  17.464   -7.575  118.382   -3.612   0.298  -0.503  C13  JL2  11  
JL2  N1   N1   N  0  1  N  N  N  21.693  -10.405  120.001    1.609  -0.857  -0.354  N1   JL2  12  
JL2  N2   N2   N  0  1  Y  N  N  19.685   -9.548  119.231   -0.524   0.076  -0.226  N2   JL2  13  
JL2  C3   C12  C  0  1  Y  N  N  23.606   -9.345  120.964    3.786  -1.798   0.100  C3   JL2  14  
JL2  N3   N3   N  0  1  Y  N  N  20.088  -11.919  119.395    1.315   1.299   0.495  N3   JL2  15  
JL2  C1   C13  C  0  1  Y  N  N  24.155   -7.051  120.483    5.753  -0.427  -0.077  C1   JL2  16  
JL2  C2   C14  C  0  1  Y  N  N  24.436   -8.245  121.128    5.162  -1.656   0.191  C2   JL2  17  
JL2  N4   N4   N  0  1  Y  N  N  17.433   -9.010  118.412   -2.708   1.246  -0.007  N4   JL2  18  
JL2  C15  C15  C  0  1  Y  N  N  18.290   -5.489  119.174   -4.272  -1.245  -2.216  C15  JL2  19  
JL2  C16  C16  C  0  1  Y  N  N  17.472   -4.832  118.272   -5.400  -1.571  -1.486  C16  JL2  20  
JL2  C17  C17  C  0  1  Y  N  N  16.644   -5.531  117.414   -5.635  -0.966  -0.264  C17  JL2  21  
JL2  C18  C18  C  0  1  Y  N  N  16.637   -6.910  117.489   -4.746  -0.032   0.228  C18  JL2  22  
JL2  C19  C19  C  0  1  N  N  N  15.780   -4.788  116.401   -6.866  -1.324   0.528  C19  JL2  23  
JL2  C20  C20  C  0  1  N  N  N  14.322   -4.696  116.812   -8.016  -0.397   0.130  C20  JL2  24  
JL2  C21  C21  C  0  1  N  N  N  14.113   -3.840  117.979   -9.219  -0.746   0.904  C21  JL2  25  
JL2  N5   N5   N  0  1  N  N  N  14.004   -3.130  118.875  -10.147  -1.016   1.502  N5   JL2  26  
JL2  O1   O1   O  0  1  N  N  N  22.851   -5.742  119.068    5.541   1.862  -0.697  O1   JL2  27  
JL2  C22  C22  C  0  1  N  N  N  21.751   -5.600  118.165    4.669   2.935  -1.059  C22  JL2  28  
JL2  O2   O2   O  0  1  N  N  N  25.003   -5.981  120.606    7.105  -0.287   0.012  O2   JL2  29  
JL2  C23  C23  C  0  1  N  N  N  25.968   -5.871  119.529    7.635   0.101   1.281  C23  JL2  30  
JL2  O3   O3   O  0  1  N  N  N  25.587   -8.240  121.872    5.934  -2.719   0.542  O3   JL2  31  
JL2  C24  C24  C  0  1  N  N  N  26.097   -9.494  122.263    5.260  -3.952   0.802  C24  JL2  32  
JL2  H1   H1   H  0  1  N  N  N  18.917   -7.370  119.958   -2.495  -0.060  -2.297  H1   JL2  33  
JL2  H2   H2   H  0  1  N  N  N  21.307   -7.972  118.877    2.974   1.361  -0.803  H2   JL2  34  
JL2  H3   H3   H  0  1  N  N  N  15.413   -9.401  117.634   -4.056   2.882   0.508  H3   JL2  35  
JL2  H4   H4   H  0  1  N  N  N  18.545  -13.214  118.849    1.008   3.226   1.248  H4   JL2  36  
JL2  H5   H5   H  0  1  N  N  N  16.012  -11.927  117.856   -1.909   4.143   1.276  H5   JL2  37  
JL2  H6   H6   H  0  1  N  N  N  22.156  -11.239  120.302    1.229  -1.697  -0.655  H6   JL2  38  
JL2  H7   H7   H  0  1  N  N  N  23.829  -10.275  121.466    3.327  -2.753   0.308  H7   JL2  39  
JL2  H8   H8   H  0  1  N  N  N  18.934   -4.919  119.827   -4.092  -1.718  -3.170  H8   JL2  40  
JL2  H9   H9   H  0  1  N  N  N  17.481   -3.753  118.238   -6.100  -2.298  -1.871  H9   JL2  41  
JL2  H10  H10  H  0  1  N  N  N  15.980   -7.477  116.845   -4.930   0.440   1.182  H10  JL2  42  
JL2  H11  H11  H  0  1  N  N  N  15.839   -5.316  115.438   -7.144  -2.358   0.321  H11  JL2  43  
JL2  H12  H12  H  0  1  N  N  N  16.176   -3.768  116.285   -6.659  -1.210   1.592  H12  JL2  44  
JL2  H13  H13  H  0  1  N  N  N  13.745   -4.288  115.969   -7.738   0.637   0.338  H13  JL2  45  
JL2  H14  H14  H  0  1  N  N  N  13.960   -5.707  117.049   -8.224  -0.511  -0.934  H14  JL2  46  
JL2  H15  H15  H  0  1  N  N  N  21.724   -4.571  117.778    5.256   3.835  -1.242  H15  JL2  47  
JL2  H16  H16  H  0  1  N  N  N  21.871   -6.304  117.328    4.122   2.669  -1.964  H16  JL2  48  
JL2  H17  H17  H  0  1  N  N  N  20.812   -5.817  118.695    3.964   3.119  -0.249  H17  JL2  49  
JL2  H18  H18  H  0  1  N  N  N  26.609   -4.993  119.698    7.221   1.068   1.567  H18  JL2  50  
JL2  H19  H19  H  0  1  N  N  N  26.589   -6.778  119.500    7.368  -0.645   2.030  H19  JL2  51  
JL2  H20  H20  H  0  1  N  N  N  25.438   -5.759  118.572    8.720   0.176   1.214  H20  JL2  52  
JL2  H21  H21  H  0  1  N  N  N  27.016   -9.350  122.850    4.557  -3.816   1.625  H21  JL2  53  
JL2  H22  H22  H  0  1  N  N  N  25.349  -10.019  122.876    4.717  -4.265  -0.090  H22  JL2  54  
JL2  H23  H23  H  0  1  N  N  N  26.324  -10.093  121.368    5.990  -4.716   1.070  H23  JL2  55  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
JL2  C19  C20  SING  N  N   1  
JL2  C19  C17  SING  N  N   2  
JL2  C20  C21  SING  N  N   3  
JL2  C17  C18  DOUB  Y  N   4  
JL2  C17  C16  SING  Y  N   5  
JL2  C18  C13  SING  Y  N   6  
JL2  C21  N5   TRIP  N  N   7  
JL2  C11  C12  DOUB  Y  N   8  
JL2  C11  N4   SING  Y  N   9  
JL2  C12  C9   SING  Y  N  10  
JL2  C22  O1   SING  N  N  11  
JL2  C16  C15  DOUB  Y  N  12  
JL2  C13  N4   SING  N  N  13  
JL2  C13  C14  DOUB  Y  N  14  
JL2  N4   C8   SING  Y  N  15  
JL2  C9   C8   DOUB  Y  N  16  
JL2  C9   C10  SING  Y  N  17  
JL2  C8   N2   SING  Y  N  18  
JL2  C10  N3   DOUB  Y  N  19  
JL2  O1   C6   SING  N  N  20  
JL2  C15  C14  SING  Y  N  21  
JL2  N2   C7   DOUB  Y  N  22  
JL2  N3   C7   SING  Y  N  23  
JL2  C5   C6   DOUB  Y  N  24  
JL2  C5   C4   SING  Y  N  25  
JL2  C23  O2   SING  N  N  26  
JL2  C7   N1   SING  N  N  27  
JL2  C6   C1   SING  Y  N  28  
JL2  N1   C4   SING  N  N  29  
JL2  C4   C3   DOUB  Y  N  30  
JL2  C1   O2   SING  N  N  31  
JL2  C1   C2   DOUB  Y  N  32  
JL2  C3   C2   SING  Y  N  33  
JL2  C2   O3   SING  N  N  34  
JL2  O3   C24  SING  N  N  35  
JL2  C14  H1   SING  N  N  36  
JL2  C5   H2   SING  N  N  37  
JL2  C11  H3   SING  N  N  38  
JL2  C10  H4   SING  N  N  39  
JL2  C12  H5   SING  N  N  40  
JL2  N1   H6   SING  N  N  41  
JL2  C3   H7   SING  N  N  42  
JL2  C15  H8   SING  N  N  43  
JL2  C16  H9   SING  N  N  44  
JL2  C18  H10  SING  N  N  45  
JL2  C19  H11  SING  N  N  46  
JL2  C19  H12  SING  N  N  47  
JL2  C20  H13  SING  N  N  48  
JL2  C20  H14  SING  N  N  49  
JL2  C22  H15  SING  N  N  50  
JL2  C22  H16  SING  N  N  51  
JL2  C22  H17  SING  N  N  52  
JL2  C23  H18  SING  N  N  53  
JL2  C23  H19  SING  N  N  54  
JL2  C23  H20  SING  N  N  55  
JL2  C24  H21  SING  N  N  56  
JL2  C24  H22  SING  N  N  57  
JL2  C24  H23  SING  N  N  58  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
JL2  InChI             InChI                 1.03   "InChI=1S/C24H23N5O3/c1-30-20-13-18(14-21(31-2)22(20)32-3)27-24-26-15-17-9-11-29(23(17)28-24)19-8-4-6-16(12-19)7-5-10-25/h4,6,8-9,11-15H,5,7H2,1-3H3,(H,26,27,28)"  
JL2  InChIKey          InChI                 1.03   KKVZKYOBQGDKIB-UHFFFAOYSA-N  
JL2  SMILES_CANONICAL  CACTVS                3.385  "COc1cc(Nc2ncc3ccn(c4cccc(CCC#N)c4)c3n2)cc(OC)c1OC"  
JL2  SMILES            CACTVS                3.385  "COc1cc(Nc2ncc3ccn(c4cccc(CCC#N)c4)c3n2)cc(OC)c1OC"  
JL2  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "COc1cc(cc(c1OC)OC)Nc2ncc3ccn(c3n2)c4cccc(c4)CCC#N"  
JL2  SMILES            "OpenEye OEToolkits"  2.0.7  "COc1cc(cc(c1OC)OC)Nc2ncc3ccn(c3n2)c4cccc(c4)CCC#N"  
#
_pdbx_chem_comp_identifier.comp_id          JL2
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "3-[3-[2-[(3,4,5-trimethoxyphenyl)amino]pyrrolo[2,3-d]pyrimidin-7-yl]phenyl]propanenitrile"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
JL2  "Create component"  2019-03-08  RCSB  
JL2  "Initial release"   2019-04-17  RCSB  
##
