data_JG2
# 
_chem_comp.id                                    JG2 
_chem_comp.name                                  "7-phenyl-1-[5-(pyridin-2-yl)-1,3,4-oxadiazol-2-yl]heptane-1,1-diol" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C20 H23 N3 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "7-phenyl-1-[5-(pyridin-2-yl)-1,3,4-oxadiazol-2-yl]heptan-1-one, bound form" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2011-11-02 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        353.415 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     JG2 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3PR0 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
JG2 N1   N1   N 0 1 Y N N N N N -14.223 35.830 -6.182  6.385   -0.697 -1.161 N1   JG2 1  
JG2 O1   O1   O 0 1 N Y N N N N -12.963 40.975 -2.071  1.292   2.734  0.371  O1   JG2 2  
JG2 C2   C2   C 0 1 Y N N N N N -14.457 37.155 -6.218  5.998   -0.652 0.109  C2   JG2 3  
JG2 C3   C3   C 0 1 Y N N N N N -15.231 37.719 -7.229  6.830   -1.131 1.120  C3   JG2 4  
JG2 C4   C4   C 0 1 Y N N N N N -15.766 36.887 -8.203  8.065   -1.656 0.782  C4   JG2 5  
JG2 C5   C5   C 0 1 Y N N N N N -15.504 35.520 -8.133  8.429   -1.684 -0.556 C5   JG2 6  
JG2 C6   C6   C 0 1 Y N N N N N -14.721 35.019 -7.099  7.555   -1.191 -1.508 C6   JG2 7  
JG2 C7   C7   C 0 1 Y N N N N N -13.894 37.957 -5.233  4.675   -0.088 0.452  C7   JG2 8  
JG2 N8   N8   N 0 1 Y N N N N N -13.132 37.554 -4.230  4.167   0.026  1.657  N8   JG2 9  
JG2 N9   N9   N 0 1 Y N N N N N -12.795 38.526 -3.549  2.999   0.561  1.576  N9   JG2 10 
JG2 C10  C10  C 0 1 Y N N N N N -13.303 39.628 -4.072  2.720   0.808  0.326  C10  JG2 11 
JG2 O11  O11  O 0 1 Y N N N N N -14.031 39.315 -5.167  3.769   0.411  -0.412 O11  JG2 12 
JG2 C12  C12  C 0 1 N N N N N N -13.086 41.018 -3.504  1.451   1.432  -0.196 C12  JG2 13 
JG2 C13  C13  C 0 1 N N N N N N -14.272 41.925 -3.884  0.256   0.558  0.193  C13  JG2 14 
JG2 O14  O14  O 0 1 N N N N N N -11.873 41.510 -4.095  1.521   1.537  -1.619 O14  JG2 15 
JG2 C15  C15  C 0 1 N N N N N N -14.151 43.333 -3.262  -1.032  1.192  -0.336 C15  JG2 16 
JG2 C16  C16  C 0 1 N N N N N N -15.337 44.235 -3.656  -2.227  0.318  0.052  C16  JG2 17 
JG2 C17  C17  C 0 1 N N N N N N -15.338 44.496 -5.156  -3.515  0.952  -0.477 C17  JG2 18 
JG2 C18  C18  C 0 1 N N N N N N -16.527 45.326 -5.658  -4.710  0.078  -0.089 C18  JG2 19 
JG2 C19  C19  C 0 1 N N N N N N -16.306 45.509 -7.160  -5.998  0.711  -0.618 C19  JG2 20 
JG2 C20  C20  C 0 1 Y N N N N N -17.428 46.192 -7.938  -7.175  -0.149 -0.236 C20  JG2 21 
JG2 C21  C21  C 0 1 Y N N N N N -17.153 46.707 -9.208  -7.594  -1.162 -1.079 C21  JG2 22 
JG2 C22  C22  C 0 1 Y N N N N N -18.165 47.294 -9.961  -8.673  -1.951 -0.728 C22  JG2 23 
JG2 C23  C23  C 0 1 Y N N N N N -19.460 47.339 -9.448  -9.334  -1.727 0.466  C23  JG2 24 
JG2 C24  C24  C 0 1 Y N N N N N -19.739 46.803 -8.188  -8.914  -0.716 1.309  C24  JG2 25 
JG2 C25  C25  C 0 1 Y N N N N N -18.727 46.216 -7.434  -7.832  0.070  0.961  C25  JG2 26 
JG2 HO1  HO1  H 0 1 N Y N N N N -12.828 41.854 -1.738  1.237   2.739  1.336  HO1  JG2 27 
JG2 H3   H3   H 0 1 N N N N N N -15.412 38.783 -7.255  6.514   -1.094 2.152  H3   JG2 28 
JG2 H4   H4   H 0 1 N N N N N N -16.373 37.291 -8.999  8.731   -2.035 1.544  H4   JG2 29 
JG2 H5   H5   H 0 1 N N N N N N -15.908 34.852 -8.879  9.387   -2.087 -0.852 H5   JG2 30 
JG2 H6   H6   H 0 1 N N N N N N -14.518 33.960 -7.045  7.836   -1.211 -2.551 H6   JG2 31 
JG2 H13  H13  H 0 1 N N N N N N -14.299 42.027 -4.979  0.377   -0.435 -0.240 H13  JG2 32 
JG2 H13A H13A H 0 0 N N N N N N -15.200 41.460 -3.520  0.202   0.478  1.278  H13A JG2 33 
JG2 HO14 HO14 H 0 0 N N N N N N -11.967 41.533 -5.040  1.629   0.689  -2.071 HO14 JG2 34 
JG2 H15  H15  H 0 1 N N N N N N -14.131 43.235 -2.167  -1.153  2.185  0.096  H15  JG2 35 
JG2 H15A H15A H 0 0 N N N N N N -13.220 43.798 -3.619  -0.979  1.272  -1.422 H15A JG2 36 
JG2 H16  H16  H 0 1 N N N N N N -16.277 43.736 -3.377  -2.106  -0.675 -0.380 H16  JG2 37 
JG2 H16A H16A H 0 0 N N N N N N -15.252 45.194 -3.124  -2.281  0.238  1.138  H16A JG2 38 
JG2 H17  H17  H 0 1 N N N N N N -14.417 45.044 -5.403  -3.636  1.945  -0.045 H17  JG2 39 
JG2 H17A H17A H 0 0 N N N N N N -15.368 43.522 -5.667  -3.461  1.032  -1.563 H17A JG2 40 
JG2 H18  H18  H 0 1 N N N N N N -17.475 44.802 -5.466  -4.589  -0.915 -0.521 H18  JG2 41 
JG2 H18A H18A H 0 0 N N N N N N -16.563 46.301 -5.149  -4.764  -0.002 0.997  H18A JG2 42 
JG2 H19  H19  H 0 1 N N N N N N -15.404 46.126 -7.282  -6.119  1.705  -0.186 H19  JG2 43 
JG2 H19A H19A H 0 0 N N N N N N -16.174 44.506 -7.593  -5.944  0.791  -1.704 H19A JG2 44 
JG2 H21  H21  H 0 1 N N N N N N -16.151 46.649 -9.606  -7.078  -1.336 -2.011 H21  JG2 45 
JG2 H22  H22  H 0 1 N N N N N N -17.949 47.711 -10.934 -9.001  -2.741 -1.387 H22  JG2 46 
JG2 H23  H23  H 0 1 N N N N N N -20.252 47.790 -10.027 -10.177 -2.343 0.739  H23  JG2 47 
JG2 H24  H24  H 0 1 N N N N N N -20.745 46.844 -7.797  -9.431  -0.541 2.241  H24  JG2 48 
JG2 H25  H25  H 0 1 N N N N N N -18.946 45.784 -6.469  -7.502  0.859  1.621  H25  JG2 49 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
JG2 C6  N1   DOUB Y N 1  
JG2 C2  N1   SING Y N 2  
JG2 C12 O1   SING N N 3  
JG2 O1  HO1  SING N N 4  
JG2 C3  C2   DOUB Y N 5  
JG2 C2  C7   SING N N 6  
JG2 C4  C3   SING Y N 7  
JG2 C3  H3   SING N N 8  
JG2 C4  C5   DOUB Y N 9  
JG2 C4  H4   SING N N 10 
JG2 C5  C6   SING Y N 11 
JG2 C5  H5   SING N N 12 
JG2 C6  H6   SING N N 13 
JG2 C7  O11  SING Y N 14 
JG2 C7  N8   DOUB Y N 15 
JG2 N8  N9   SING Y N 16 
JG2 C10 N9   DOUB Y N 17 
JG2 O11 C10  SING Y N 18 
JG2 C10 C12  SING N N 19 
JG2 O14 C12  SING N N 20 
JG2 C13 C12  SING N N 21 
JG2 C13 C15  SING N N 22 
JG2 C13 H13  SING N N 23 
JG2 C13 H13A SING N N 24 
JG2 O14 HO14 SING N N 25 
JG2 C16 C15  SING N N 26 
JG2 C15 H15  SING N N 27 
JG2 C15 H15A SING N N 28 
JG2 C17 C16  SING N N 29 
JG2 C16 H16  SING N N 30 
JG2 C16 H16A SING N N 31 
JG2 C18 C17  SING N N 32 
JG2 C17 H17  SING N N 33 
JG2 C17 H17A SING N N 34 
JG2 C19 C18  SING N N 35 
JG2 C18 H18  SING N N 36 
JG2 C18 H18A SING N N 37 
JG2 C20 C19  SING N N 38 
JG2 C19 H19  SING N N 39 
JG2 C19 H19A SING N N 40 
JG2 C21 C20  DOUB Y N 41 
JG2 C20 C25  SING Y N 42 
JG2 C22 C21  SING Y N 43 
JG2 C21 H21  SING N N 44 
JG2 C22 C23  DOUB Y N 45 
JG2 C22 H22  SING N N 46 
JG2 C23 C24  SING Y N 47 
JG2 C23 H23  SING N N 48 
JG2 C24 C25  DOUB Y N 49 
JG2 C24 H24  SING N N 50 
JG2 C25 H25  SING N N 51 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
JG2 SMILES           ACDLabs              12.01 "n3c(c1nnc(o1)C(O)(O)CCCCCCc2ccccc2)cccc3"                                                                                                    
JG2 InChI            InChI                1.03  "InChI=1S/C20H23N3O3/c24-20(25,14-8-2-1-4-10-16-11-5-3-6-12-16)19-23-22-18(26-19)17-13-7-9-15-21-17/h3,5-7,9,11-13,15,24-25H,1-2,4,8,10,14H2" 
JG2 InChIKey         InChI                1.03  KSJFCWCEVWDLIS-UHFFFAOYSA-N                                                                                                                   
JG2 SMILES_CANONICAL CACTVS               3.370 "OC(O)(CCCCCCc1ccccc1)c2oc(nn2)c3ccccn3"                                                                                                      
JG2 SMILES           CACTVS               3.370 "OC(O)(CCCCCCc1ccccc1)c2oc(nn2)c3ccccn3"                                                                                                      
JG2 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 "c1ccc(cc1)CCCCCCC(c2nnc(o2)c3ccccn3)(O)O"                                                                                                    
JG2 SMILES           "OpenEye OEToolkits" 1.7.2 "c1ccc(cc1)CCCCCCC(c2nnc(o2)c3ccccn3)(O)O"                                                                                                    
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
JG2 "SYSTEMATIC NAME" ACDLabs              12.01 "7-phenyl-1-[5-(pyridin-2-yl)-1,3,4-oxadiazol-2-yl]heptane-1,1-diol" 
JG2 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 "7-phenyl-1-(5-pyridin-2-yl-1,3,4-oxadiazol-2-yl)heptane-1,1-diol"   
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
JG2 "Create component" 2011-11-02 RCSB 
JG2 "Modify synonyms"  2021-03-13 RCSB 
JG2 "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      JG2 
_pdbx_chem_comp_synonyms.name         "7-phenyl-1-[5-(pyridin-2-yl)-1,3,4-oxadiazol-2-yl]heptan-1-one, bound form" 
_pdbx_chem_comp_synonyms.provenance   PDB 
_pdbx_chem_comp_synonyms.type         ? 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            JG2 
_pdbx_chem_comp_pcm.modified_residue_id                SER 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           Lipid/lipid-like 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C12 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   OG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
