data_H82
#

_chem_comp.id                                   H82
_chem_comp.name                                 "3-methoxy-~{N}-(1-methylpiperidin-1-ium-4-yl)-4-[[4-[(3-oxidanylidene-1,2-dihydroinden-4-yl)oxy]-5-(trifluoromethyl)pyrimidin-2-yl]amino]benzamide"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C28 H29 F3 N5 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   1
_chem_comp.pdbx_initial_date                    2018-11-21
_chem_comp.pdbx_modified_date                   2019-09-04
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       556.556
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    H82
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6I8Z
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
H82  C5   C1   C  0  1  Y  N  N   5.258  22.849  29.052  -3.425  -1.159   0.218  C5   H82   1  
H82  C6   C2   C  0  1  Y  N  N   4.472  21.702  29.310  -2.751  -2.328  -0.131  C6   H82   2  
H82  C7   C3   C  0  1  Y  N  N   5.027  20.836  30.241  -1.381  -2.271  -0.311  C7   H82   3  
H82  C15  C4   C  0  1  Y  N  N   5.659  24.594  27.440  -5.359  -0.030   0.839  C15  H82   4  
H82  C17  C5   C  0  1  Y  N  N   7.006  26.574  27.531  -6.131   1.343   2.645  C17  H82   5  
H82  C20  C6   C  0  1  Y  N  N   5.971  24.422  26.077  -5.796   0.941  -0.085  C20  H82   6  
H82  C21  C7   C  0  1  N  N  N   6.198  23.746  23.767  -6.342   2.235  -2.046  C21  H82   7  
H82  C24  C8   C  0  1  N  N  N  10.709  30.542  32.228   7.521  -0.194  -1.081  C24  H82   8  
H82  C26  C9   C  0  1  N  N  N  11.673  30.237  29.947   7.620  -0.991   1.281  C26  H82   9  
H82  C28  C10  C  0  1  N  N  N  12.199  33.846  31.057  10.977  -1.450  -0.333  C28  H82  10  
H82  C1   C11  C  0  1  N  N  N  12.383  31.583  30.089   9.144  -1.031   1.155  C1   H82  11  
H82  N2   N1   N  0  1  N  N  N   7.931  22.489  31.281  -0.730   1.169   0.347  N2   H82  12  
H82  C3   C12  C  0  1  Y  N  N   6.816  22.202  30.548  -1.422  -0.021   0.185  C3   H82  13  
H82  N4   N2   N  0  1  Y  N  N   6.405  23.113  29.647  -2.734  -0.035   0.366  N4   H82  14  
H82  N8   N3   N  0  1  Y  N  N   6.184  21.064  30.876  -0.754  -1.116  -0.148  N8   H82  15  
H82  C9   C13  C  0  1  N  N  N   3.159  21.387  28.652  -3.498  -3.625  -0.308  C9   H82  16  
H82  F10  F1   F  0  1  N  N  N   2.572  20.324  29.161  -4.451  -3.479  -1.322  F10  H82  17  
H82  F11  F2   F  0  1  N  N  N   2.278  22.378  28.774  -2.598  -4.638  -0.656  F11  H82  18  
H82  F12  F3   F  0  1  N  N  N   3.290  21.148  27.344  -4.139  -3.961   0.889  F12  H82  19  
H82  O13  O1   O  0  1  N  N  N   4.832  23.621  28.005  -4.768  -1.168   0.399  O13  H82  20  
H82  C14  C14  C  0  1  N  N  N   7.030  25.017  24.004  -6.782   2.986  -0.781  C14  H82  21  
H82  C16  C15  C  0  1  Y  N  N   6.160  25.672  28.161  -5.529   0.184   2.197  C16  H82  22  
H82  C18  C16  C  0  1  Y  N  N   7.328  26.415  26.191  -6.568   2.298   1.743  C18  H82  23  
H82  C19  C17  C  0  1  Y  N  N   6.812  25.349  25.459  -6.403   2.107   0.386  C19  H82  24  
H82  N22  N4   N  1  1  N  N  N  11.593  32.487  30.980   9.516  -1.336  -0.232  N22  H82  25  
H82  C23  C18  C  0  1  N  N  N  11.442  31.878  32.336   9.049  -0.264  -1.120  C23  H82  26  
H82  C25  C19  C  0  1  N  N  N  11.450  29.594  31.305   7.065   0.093   0.353  C25  H82  27  
H82  N27  N5   N  0  1  N  N  N  10.719  28.331  31.178   5.601   0.086   0.412  N27  H82  28  
H82  C29  C20  C  0  1  Y  N  N   9.678  25.660  30.425   2.755   0.032   0.539  C29  H82  29  
H82  C30  C21  C  0  1  Y  N  N  10.227  25.999  31.662   3.435   1.197   0.174  C30  H82  30  
H82  C31  C22  C  0  1  Y  N  N  10.011  25.170  32.761   2.716   2.356  -0.133  C31  H82  31  
H82  C32  C23  C  0  1  Y  N  N   9.267  24.007  32.616   1.337   2.345  -0.076  C32  H82  32  
H82  C33  C24  C  0  1  Y  N  N   8.708  23.666  31.362   0.663   1.179   0.289  C33  H82  33  
H82  C34  C25  C  0  1  Y  N  N   8.933  24.506  30.271   1.379   0.025   0.590  C34  H82  34  
H82  O35  O2   O  0  1  N  N  N   9.037  23.090  33.606   0.635   3.471  -0.374  O35  H82  35  
H82  C36  C26  C  0  1  N  N  N   9.643  23.301  34.888   1.390   4.629  -0.739  C36  H82  36  
H82  C37  C27  C  0  1  N  N  N  11.085  27.215  31.832   4.909   1.204   0.115  C37  H82  37  
H82  O38  O3   O  0  1  N  N  N  12.072  27.182  32.564   5.500   2.218  -0.203  O38  H82  38  
H82  C39  C28  C  0  1  N  N  N   5.569  23.388  25.096  -5.725   0.949  -1.552  C39  H82  39  
H82  O40  O4   O  0  1  N  N  N   4.858  22.422  25.303  -5.252   0.074  -2.246  O40  H82  40  
H82  H44  H1   H  0  1  N  N  N   4.495  19.924  30.467  -0.828  -3.158  -0.582  H44  H82  41  
H82  H48  H2   H  0  1  N  N  N   7.416  27.404  28.087  -6.262   1.505   3.705  H48  H82  42  
H82  H50  H3   H  0  1  N  N  N   5.417  23.938  23.017  -7.205   2.022  -2.678  H50  H82  43  
H82  H51  H4   H  0  1  N  N  N   6.846  22.927  23.421  -5.606   2.820  -2.596  H51  H82  44  
H82  H56  H5   H  0  1  N  N  N   9.698  30.716  31.830   7.176   0.604  -1.739  H56  H82  45  
H82  H55  H6   H  0  1  N  N  N  10.636  30.089  33.228   7.104  -1.145  -1.412  H55  H82  46  
H82  H58  H7   H  0  1  N  N  N  10.700  30.393  29.459   7.206  -1.959   0.999  H58  H82  47  
H82  H59  H8   H  0  1  N  N  N  12.290  29.568  29.329   7.346  -0.763   2.311  H59  H82  48  
H82  H62  H9   H  0  1  N  N  N  11.593  34.481  31.719  11.324  -2.250   0.321  H62  H82  49  
H82  H63  H10  H  0  1  N  N  N  13.221  33.770  31.457  11.254  -1.676  -1.362  H63  H82  50  
H82  H61  H11  H  0  1  N  N  N  12.231  34.290  30.051  11.437  -0.509  -0.031  H61  H82  51  
H82  H42  H12  H  0  1  N  N  N  13.381  31.424  30.524   9.558  -0.063   1.437  H42  H82  52  
H82  H41  H13  H  0  1  N  N  N  12.485  32.047  29.097   9.543  -1.802   1.814  H41  H82  53  
H82  H43  H14  H  0  1  N  N  N   8.252  21.739  31.859  -1.215   1.995   0.501  H43  H82  54  
H82  H46  H15  H  0  1  N  N  N   8.095  24.827  23.804  -6.263   3.943  -0.715  H46  H82  55  
H82  H45  H16  H  0  1  N  N  N   6.677  25.837  23.362  -7.860   3.145  -0.796  H45  H82  56  
H82  H47  H17  H  0  1  N  N  N   5.894  25.806  29.199  -5.191  -0.557   2.906  H47  H82  57  
H82  H49  H18  H  0  1  N  N  N   7.985  27.125  25.711  -7.037   3.201   2.104  H49  H82  58  
H82  H52  H19  H  0  1  N  N  N  10.679  32.582  30.585   9.091  -2.208  -0.510  H52  H82  59  
H82  H53  H20  H  0  1  N  N  N  12.437  31.713  32.775   9.377  -0.468  -2.139  H53  H82  60  
H82  H54  H21  H  0  1  N  N  N  10.866  32.559  32.979   9.464   0.688  -0.789  H54  H82  61  
H82  H57  H22  H  0  1  N  N  N  12.435  29.388  31.749   7.439   1.068   0.666  H57  H82  62  
H82  H60  H23  H  0  1  N  N  N   9.917  28.298  30.582   5.130  -0.723   0.665  H60  H82  63  
H82  H64  H24  H  0  1  N  N  N   9.837  26.308  29.576   3.308  -0.864   0.777  H64  H82  64  
H82  H65  H25  H  0  1  N  N  N  10.422  25.432  33.725   3.239   3.258  -0.415  H65  H82  65  
H82  H66  H26  H  0  1  N  N  N   8.524  24.254  29.304   0.854  -0.876   0.871  H66  H82  66  
H82  H67  H27  H  0  1  N  N  N   9.362  22.482  35.566   0.710   5.454  -0.951  H67  H82  67  
H82  H68  H28  H  0  1  N  N  N  10.737  23.326  34.777   2.051   4.905   0.082  H68  H82  68  
H82  H69  H29  H  0  1  N  N  N   9.295  24.258  35.305   1.984   4.410  -1.626  H69  H82  69  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
H82  C21  C14  SING  N  N   1  
H82  C21  C39  SING  N  N   2  
H82  C14  C19  SING  N  N   3  
H82  C39  O40  DOUB  N  N   4  
H82  C39  C20  SING  N  N   5  
H82  C19  C20  DOUB  Y  N   6  
H82  C19  C18  SING  Y  N   7  
H82  C20  C15  SING  Y  N   8  
H82  C18  C17  DOUB  Y  N   9  
H82  F12  C9   SING  N  N  10  
H82  C15  O13  SING  N  N  11  
H82  C15  C16  DOUB  Y  N  12  
H82  C17  C16  SING  Y  N  13  
H82  O13  C5   SING  N  N  14  
H82  C9   F11  SING  N  N  15  
H82  C9   F10  SING  N  N  16  
H82  C9   C6   SING  N  N  17  
H82  C5   C6   DOUB  Y  N  18  
H82  C5   N4   SING  Y  N  19  
H82  C6   C7   SING  Y  N  20  
H82  N4   C3   DOUB  Y  N  21  
H82  C26  C1   SING  N  N  22  
H82  C26  C25  SING  N  N  23  
H82  C1   N22  SING  N  N  24  
H82  C7   N8   DOUB  Y  N  25  
H82  C34  C29  DOUB  Y  N  26  
H82  C34  C33  SING  Y  N  27  
H82  C29  C30  SING  Y  N  28  
H82  C3   N8   SING  Y  N  29  
H82  C3   N2   SING  N  N  30  
H82  N22  C28  SING  N  N  31  
H82  N22  C23  SING  N  N  32  
H82  N27  C25  SING  N  N  33  
H82  N27  C37  SING  N  N  34  
H82  N2   C33  SING  N  N  35  
H82  C25  C24  SING  N  N  36  
H82  C33  C32  DOUB  Y  N  37  
H82  C30  C37  SING  N  N  38  
H82  C30  C31  DOUB  Y  N  39  
H82  C37  O38  DOUB  N  N  40  
H82  C24  C23  SING  N  N  41  
H82  C32  C31  SING  Y  N  42  
H82  C32  O35  SING  N  N  43  
H82  O35  C36  SING  N  N  44  
H82  C7   H44  SING  N  N  45  
H82  C17  H48  SING  N  N  46  
H82  C21  H50  SING  N  N  47  
H82  C21  H51  SING  N  N  48  
H82  C24  H56  SING  N  N  49  
H82  C24  H55  SING  N  N  50  
H82  C26  H58  SING  N  N  51  
H82  C26  H59  SING  N  N  52  
H82  C28  H62  SING  N  N  53  
H82  C28  H63  SING  N  N  54  
H82  C28  H61  SING  N  N  55  
H82  C1   H42  SING  N  N  56  
H82  C1   H41  SING  N  N  57  
H82  N2   H43  SING  N  N  58  
H82  C14  H46  SING  N  N  59  
H82  C14  H45  SING  N  N  60  
H82  C16  H47  SING  N  N  61  
H82  C18  H49  SING  N  N  62  
H82  N22  H52  SING  N  N  63  
H82  C23  H53  SING  N  N  64  
H82  C23  H54  SING  N  N  65  
H82  C25  H57  SING  N  N  66  
H82  N27  H60  SING  N  N  67  
H82  C29  H64  SING  N  N  68  
H82  C31  H65  SING  N  N  69  
H82  C34  H66  SING  N  N  70  
H82  C36  H67  SING  N  N  71  
H82  C36  H68  SING  N  N  72  
H82  C36  H69  SING  N  N  73  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
H82  InChI             InChI                 1.03   "InChI=1S/C28H28F3N5O4/c1-36-12-10-18(11-13-36)33-25(38)17-6-8-20(23(14-17)39-2)34-27-32-15-19(28(29,30)31)26(35-27)40-22-5-3-4-16-7-9-21(37)24(16)22/h3-6,8,14-15,18H,7,9-13H2,1-2H3,(H,33,38)(H,32,34,35)/p+1"  
H82  InChIKey          InChI                 1.03   QUSSZSMDFABHLI-UHFFFAOYSA-O  
H82  SMILES_CANONICAL  CACTVS                3.385  "COc1cc(ccc1Nc2ncc(c(Oc3cccc4CCC(=O)c34)n2)C(F)(F)F)C(=O)NC5CC[NH+](C)CC5"  
H82  SMILES            CACTVS                3.385  "COc1cc(ccc1Nc2ncc(c(Oc3cccc4CCC(=O)c34)n2)C(F)(F)F)C(=O)NC5CC[NH+](C)CC5"  
H82  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "C[NH+]1CCC(CC1)NC(=O)c2ccc(c(c2)OC)Nc3ncc(c(n3)Oc4cccc5c4C(=O)CC5)C(F)(F)F"  
H82  SMILES            "OpenEye OEToolkits"  2.0.6  "C[NH+]1CCC(CC1)NC(=O)c2ccc(c(c2)OC)Nc3ncc(c(n3)Oc4cccc5c4C(=O)CC5)C(F)(F)F"  
#
_pdbx_chem_comp_identifier.comp_id          H82
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.6
_pdbx_chem_comp_identifier.identifier       "3-methoxy-~{N}-(1-methylpiperidin-1-ium-4-yl)-4-[[4-[(3-oxidanylidene-1,2-dihydroinden-4-yl)oxy]-5-(trifluoromethyl)pyrimidin-2-yl]amino]benzamide"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
H82  "Create component"    2018-11-21  EBI   
H82  "Other modification"  2018-11-22  EBI   
H82  "Initial release"     2019-02-20  RCSB  
H82  "Other modification"  2019-09-04  EBI   
##
