data_B32
#

_chem_comp.id                                   B32
_chem_comp.name                                 "5'-S-[2-(decylamino)ethyl]-5'-thioadenosine"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C22 H38 N6 O3 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "S-adenosyl-N-decyl-aminoethyl (SADAE)"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2009-05-04
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       466.641
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    B32
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3HA7
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
B32  CAR     CAR   C  0  1  N  N  N  -30.139  10.915   8.007  13.170   0.846  -0.376  CAR   B32   1  
B32  CAS     CAS   C  0  1  N  N  N  -29.100   9.958   8.620  11.881   0.989   0.437  CAS   B32   2  
B32  CAT     CAT   C  0  1  N  N  N  -27.890  10.694   9.275  10.712   0.402  -0.356  CAT   B32   3  
B32  CAU     CAU   C  0  1  N  N  N  -27.083   9.869  10.289   9.423   0.545   0.457  CAU   B32   4  
B32  CAV     CAV   C  0  1  N  N  N  -27.882   9.644  11.577   8.253  -0.042  -0.336  CAV   B32   5  
B32  CAW     CAW   C  0  1  N  N  N  -27.296  10.400  12.760   6.964   0.101   0.477  CAW   B32   6  
B32  CAX     CAX   C  0  1  N  N  N  -27.854   9.854  14.077   5.794  -0.486  -0.315  CAX   B32   7  
B32  CAY     CAY   C  0  1  N  N  N  -28.914  10.780  14.676   4.505  -0.343   0.497  CAY   B32   8  
B32  NAZ     NAZ   N  0  1  N  N  N  -29.768  10.016  15.602   3.382  -0.907  -0.264  NAZ   B32   9  
B32  CBA     CBA   C  0  1  N  N  N  -29.749  10.714  16.900   2.125  -0.787   0.487  CBA   B32  10  
B32  CBB     CBB   C  0  1  N  N  N  -30.128   9.817  18.080   0.981  -1.383  -0.336  CBB   B32  11  
B32  SD      SD    S  0  1  N  N  N  -29.134  10.356  19.525  -0.571  -1.235   0.591  SD    B32  12  
B32  "C5'"   C5*   C  0  1  N  N  N  -27.511   9.470  19.410  -1.787  -1.984  -0.527  C5*   B32  13  
B32  "C4'"   C4*   C  0  1  N  N  S  -27.146   8.835  20.785  -3.173  -1.936   0.120  C4*   B32  14  
B32  "O4'"   O4*   O  0  1  N  N  N  -26.228   7.715  20.646  -3.653  -0.575   0.180  O4*   B32  15  
B32  "C3'"   C3*   C  0  1  N  N  S  -26.473   9.850  21.730  -4.203  -2.679  -0.758  C3*   B32  16  
B32  "O3'"   O3*   O  0  1  N  N  N  -27.093   9.759  23.030  -4.417  -4.004  -0.266  O3*   B32  17  
B32  "C2'"   C2*   C  0  1  N  N  R  -24.979   9.443  21.741  -5.490  -1.836  -0.622  C2*   B32  18  
B32  "O2'"   O2*   O  0  1  N  N  N  -24.359   9.763  23.001  -6.540  -2.614  -0.042  O2*   B32  19  
B32  "C1'"   C1*   C  0  1  N  N  R  -25.101   7.914  21.576  -5.086  -0.683   0.322  C1*   B32  20  
B32  N9      N9    N  0  1  Y  N  N  -23.928   7.079  21.085  -5.734   0.565  -0.089  N9    B32  21  
B32  C8      C8    C  0  1  Y  N  N  -23.215   7.228  19.967  -5.223   1.497  -0.942  C8    B32  22  
B32  N7      N7    N  0  1  Y  N  N  -22.279   6.272  19.889  -6.065   2.479  -1.084  N7    B32  23  
B32  C5      C5    C  0  1  Y  N  N  -22.415   5.501  20.972  -7.167   2.240  -0.334  C5    B32  24  
B32  C4      C4    C  0  1  Y  N  N  -23.454   6.017  21.736  -6.971   1.006   0.310  C4    B32  25  
B32  N3      N3    N  0  1  Y  N  N  -23.804   5.413  22.897  -7.922   0.537   1.110  N3    B32  26  
B32  C2      C2    C  0  1  Y  N  N  -23.190   4.324  23.367  -9.035   1.214   1.298  C2    B32  27  
B32  N1      N1    N  0  1  Y  N  N  -22.167   3.801  22.680  -9.266   2.375   0.713  N1    B32  28  
B32  C6      C6    C  0  1  Y  N  N  -21.771   4.359  21.498  -8.370   2.928  -0.098  C6    B32  29  
B32  N6      N6    N  0  1  N  N  N  -20.785   3.839  20.815  -8.621   4.144  -0.707  N6    B32  30  
B32  CAP     CAP   C  0  1  N  N  N  -32.472  11.283   9.007  15.629   1.290  -0.396  CAP   B32  31  
B32  CAQ     CAQ   C  0  1  N  N  N  -30.983  11.603   9.100  14.340   1.433   0.417  CAQ   B32  32  
B32  HAR     HAR   H  0  1  N  N  N  -29.612  11.687   7.426  13.359  -0.209  -0.574  HAR   B32  33  
B32  HARA    HARA  H  0  0  N  N  N  -30.813  10.330   7.364  13.066   1.380  -1.320  HARA  B32  34  
B32  HAS     HAS   H  0  1  N  N  N  -29.600   9.361   9.397  11.986   0.455   1.381  HAS   B32  35  
B32  HASA    HASA  H  0  0  N  N  N  -28.702   9.340   7.802  11.692   2.044   0.635  HASA  B32  36  
B32  HAT     HAT   H  0  1  N  N  N  -27.204  10.987   8.467  10.607   0.936  -1.300  HAT   B32  37  
B32  HATA    HATA  H  0  0  N  N  N  -28.315  11.538   9.838  10.900  -0.653  -0.554  HATA  B32  38  
B32  HAU     HAU   H  0  1  N  N  N  -26.842   8.893   9.843   9.527   0.011   1.401  HAU   B32  39  
B32  HAUA    HAUA  H  0  0  N  N  N  -26.165  10.421  10.538   9.234   1.600   0.655  HAUA  B32  40  
B32  HAV     HAV   H  0  1  N  N  N  -28.912   9.993  11.415   8.149   0.492  -1.280  HAV   B32  41  
B32  HAVA    HAVA  H  0  0  N  N  N  -27.848   8.570  11.812   8.442  -1.097  -0.534  HAVA  B32  42  
B32  HAW     HAW   H  0  1  N  N  N  -26.202  10.283  12.756   7.068  -0.433   1.421  HAW   B32  43  
B32  HAWA    HAWA  H  0  0  N  N  N  -27.567  11.463  12.672   6.775   1.156   0.675  HAWA  B32  44  
B32  HAX     HAX   H  0  1  N  N  N  -28.312   8.872  13.885   5.690   0.048  -1.260  HAX   B32  45  
B32  HAXA    HAXA  H  0  0  N  N  N  -27.023   9.776  14.794   5.983  -1.541  -0.514  HAXA  B32  46  
B32  HAY     HAY   H  0  1  N  N  N  -28.420  11.597  15.222   4.610  -0.878   1.441  HAY   B32  47  
B32  HAYA    HAYA  H  0  0  N  N  N  -29.532  11.199  13.869   4.317   0.712   0.695  HAYA  B32  48  
B32  HNAZ    HNAZ  H  0  0  N  N  N  -30.703   9.970  15.250   3.305  -0.472  -1.171  HNAZ  B32  49  
B32  HBA     HBA   H  0  1  N  N  N  -28.730  11.093  17.071   2.213  -1.324   1.431  HBA   B32  50  
B32  HBAA    HBAA  H  0  0  N  N  N  -30.497  11.519  16.849   1.920   0.265   0.685  HBAA  B32  51  
B32  HBB     HBB   H  0  1  N  N  N  -31.201   9.915  18.301   0.893  -0.846  -1.280  HBB   B32  52  
B32  HBBA    HBBA  H  0  0  N  N  N  -29.925   8.762  17.844   1.187  -2.435  -0.534  HBBA  B32  53  
B32  "H5'"   H5*   H  0  1  N  N  N  -27.585   8.676  18.652  -1.806  -1.431  -1.466  H5*   B32  54  
B32  "H5'A"  H5*A  H  0  0  N  N  N  -26.728  10.189  19.127  -1.513  -3.021  -0.721  H5*A  B32  55  
B32  "H4'"   H4*   H  0  1  N  N  N  -28.104   8.494  21.205  -3.140  -2.373   1.118  H4*   B32  56  
B32  "H3'"   H3*   H  0  1  N  N  N  -26.578  10.899  21.416  -3.871  -2.706  -1.796  H3*   B32  57  
B32  "HO3'"  HO3*  H  0  0  N  N  N  -26.421   9.739  23.701  -5.056  -4.516  -0.781  HO3*  B32  58  
B32  "H2'"   H2*   H  0  1  N  N  N  -24.366   9.949  20.981  -5.797  -1.447  -1.594  H2*   B32  59  
B32  "HO2'"  HO2*  H  0  0  N  N  N  -23.419   9.833  22.883  -6.792  -3.387  -0.566  HO2*  B32  60  
B32  "H1'"   H1*   H  0  1  N  N  N  -25.205   7.540  22.605  -5.348  -0.926   1.352  H1*   B32  61  
B32  H8      H8    H  0  1  N  N  N  -23.369   8.005  19.233  -4.260   1.430  -1.427  H8    B32  62  
B32  H2      H2    H  0  1  N  N  N  -23.515   3.870  24.291  -9.788   0.804   1.955  H2    B32  63  
B32  HN6     HN6   H  0  1  N  N  N  -21.070   3.706  19.866  -7.964   4.532  -1.306  HN6   B32  64  
B32  HN6A    HN6A  H  0  0  N  N  N  -19.998   4.456  20.844  -9.455   4.609  -0.536  HN6A  B32  65  
B32  HAP     HAP   H  0  1  N  N  N  -32.895  11.206  10.020  15.818   0.235  -0.594  HAP   B32  66  
B32  HAPA    HAPA  H  0  0  N  N  N  -32.985  12.084   8.455  15.524   1.825  -1.340  HAPA  B32  67  
B32  HAPB    HAPB  H  0  0  N  N  N  -32.609  10.328   8.479  16.462   1.709   0.169  HAPB  B32  68  
B32  HAQ     HAQ   H  0  1  N  N  N  -30.619  11.262  10.080  14.151   2.488   0.615  HAQ   B32  69  
B32  HAQA    HAQA  H  0  0  N  N  N  -30.873  12.689   8.963  14.444   0.899   1.361  HAQA  B32  70  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
B32  CAR    CAS     SING  N  N   1  
B32  CAR    CAQ     SING  N  N   2  
B32  CAR    HAR     SING  N  N   3  
B32  CAR    HARA    SING  N  N   4  
B32  CAS    CAT     SING  N  N   5  
B32  CAS    HAS     SING  N  N   6  
B32  CAS    HASA    SING  N  N   7  
B32  CAT    CAU     SING  N  N   8  
B32  CAT    HAT     SING  N  N   9  
B32  CAT    HATA    SING  N  N  10  
B32  CAU    CAV     SING  N  N  11  
B32  CAU    HAU     SING  N  N  12  
B32  CAU    HAUA    SING  N  N  13  
B32  CAV    CAW     SING  N  N  14  
B32  CAV    HAV     SING  N  N  15  
B32  CAV    HAVA    SING  N  N  16  
B32  CAW    CAX     SING  N  N  17  
B32  CAW    HAW     SING  N  N  18  
B32  CAW    HAWA    SING  N  N  19  
B32  CAX    CAY     SING  N  N  20  
B32  CAX    HAX     SING  N  N  21  
B32  CAX    HAXA    SING  N  N  22  
B32  CAY    NAZ     SING  N  N  23  
B32  CAY    HAY     SING  N  N  24  
B32  CAY    HAYA    SING  N  N  25  
B32  NAZ    CBA     SING  N  N  26  
B32  NAZ    HNAZ    SING  N  N  27  
B32  CBA    CBB     SING  N  N  28  
B32  CBA    HBA     SING  N  N  29  
B32  CBA    HBAA    SING  N  N  30  
B32  CBB    SD      SING  N  N  31  
B32  CBB    HBB     SING  N  N  32  
B32  CBB    HBBA    SING  N  N  33  
B32  "C5'"  SD      SING  N  N  34  
B32  "C5'"  "C4'"   SING  N  N  35  
B32  "C5'"  "H5'"   SING  N  N  36  
B32  "C5'"  "H5'A"  SING  N  N  37  
B32  "O4'"  "C4'"   SING  N  N  38  
B32  "C4'"  "C3'"   SING  N  N  39  
B32  "C4'"  "H4'"   SING  N  N  40  
B32  "O4'"  "C1'"   SING  N  N  41  
B32  "C3'"  "C2'"   SING  N  N  42  
B32  "C3'"  "O3'"   SING  N  N  43  
B32  "C3'"  "H3'"   SING  N  N  44  
B32  "O3'"  "HO3'"  SING  N  N  45  
B32  "C1'"  "C2'"   SING  N  N  46  
B32  "C2'"  "O2'"   SING  N  N  47  
B32  "C2'"  "H2'"   SING  N  N  48  
B32  "O2'"  "HO2'"  SING  N  N  49  
B32  N9     "C1'"   SING  N  N  50  
B32  "C1'"  "H1'"   SING  N  N  51  
B32  C8     N9      SING  Y  N  52  
B32  N9     C4      SING  Y  N  53  
B32  N7     C8      DOUB  Y  N  54  
B32  C8     H8      SING  N  N  55  
B32  N7     C5      SING  Y  N  56  
B32  C5     C6      DOUB  Y  N  57  
B32  C5     C4      SING  Y  N  58  
B32  C4     N3      DOUB  Y  N  59  
B32  N3     C2      SING  Y  N  60  
B32  N1     C2      DOUB  Y  N  61  
B32  C2     H2      SING  N  N  62  
B32  C6     N1      SING  Y  N  63  
B32  N6     C6      SING  N  N  64  
B32  N6     HN6     SING  N  N  65  
B32  N6     HN6A    SING  N  N  66  
B32  CAP    CAQ     SING  N  N  67  
B32  CAP    HAP     SING  N  N  68  
B32  CAP    HAPA    SING  N  N  69  
B32  CAP    HAPB    SING  N  N  70  
B32  CAQ    HAQ     SING  N  N  71  
B32  CAQ    HAQA    SING  N  N  72  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
B32  SMILES            ACDLabs               10.04  "n2c1c(ncnc1n(c2)C3OC(C(O)C3O)CSCCNCCCCCCCCCC)N"  
B32  SMILES_CANONICAL  CACTVS                3.341  "CCCCCCCCCCNCCSC[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2cnc3c(N)ncnc23"  
B32  SMILES            CACTVS                3.341  "CCCCCCCCCCNCCSC[CH]1O[CH]([CH](O)[CH]1O)n2cnc3c(N)ncnc23"  
B32  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "CCCCCCCCCCNCCSC[C@@H]1[C@H]([C@H]([C@@H](O1)n2cnc3c2ncnc3N)O)O"  
B32  SMILES            "OpenEye OEToolkits"  1.5.0  "CCCCCCCCCCNCCSCC1C(C(C(O1)n2cnc3c2ncnc3N)O)O"  
B32  InChI             InChI                 1.03   "InChI=1S/C22H38N6O3S/c1-2-3-4-5-6-7-8-9-10-24-11-12-32-13-16-18(29)19(30)22(31-16)28-15-27-17-20(23)25-14-26-21(17)28/h14-16,18-19,22,24,29-30H,2-13H2,1H3,(H2,23,25,26)/t16-,18-,19-,22-/m1/s1"  
B32  InChIKey          InChI                 1.03   CJIJFWHOTNCRDA-WGQQHEPDSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
B32  "SYSTEMATIC NAME"  ACDLabs               10.04  "5'-S-[2-(decylamino)ethyl]-5'-thioadenosine"  
B32  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "(2R,3R,4S,5S)-2-(6-aminopurin-9-yl)-5-[2-(decylamino)ethylsulfanylmethyl]oxolane-3,4-diol"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
B32  "Create component"      2009-05-04  RCSB  
B32  "Modify aromatic_flag"  2011-06-04  RCSB  
B32  "Modify descriptor"     2011-06-04  RCSB  
B32  "Modify synonyms"       2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     B32
_pdbx_chem_comp_synonyms.name        "S-adenosyl-N-decyl-aminoethyl (SADAE)"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
