data_6N2
# 
_chem_comp.id                                    6N2 
_chem_comp.name                                  "N-(2-{[2-(morpholin-4-yl)ethyl]amino}-1H-benzimidazol-5-yl)guanidine" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C14 H21 N7 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2016-05-10 
_chem_comp.pdbx_modified_date                    2017-05-19 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        303.363 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     6N2 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   Y 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5JT7 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
6N2 N1  N1  N 0 1 N N N 104.202 16.559 24.775 7.770  0.653  0.189  N1  6N2 1  
6N2 C2  C1  C 0 1 Y N N 107.533 17.000 21.911 3.814  -1.975 -0.199 C2  6N2 2  
6N2 N3  N2  N 0 1 Y N N 108.591 17.953 18.476 0.269  -0.761 -0.219 N3  6N2 3  
6N2 C4  C2  C 0 1 Y N N 107.964 17.533 19.636 1.638  -0.976 -0.150 C4  6N2 4  
6N2 N4  N3  N 0 1 N N N 107.914 18.728 16.383 -1.188 1.158  0.131  N4  6N2 5  
6N2 C5  C3  C 0 1 Y N N 107.610 18.237 17.589 0.050  0.551  0.087  C5  6N2 6  
6N2 C6  C4  C 0 1 N N N 106.942 19.398 15.530 -2.395 0.380  -0.154 C6  6N2 7  
6N2 C   C5  C 0 1 N N N 105.290 16.829 24.059 6.424  0.513  -0.059 C   6N2 8  
6N2 N   N4  N 0 1 N N N 106.552 17.006 24.672 5.760  1.485  -0.618 N   6N2 9  
6N2 N2  N5  N 0 1 N N N 105.195 16.941 22.701 5.779  -0.653 0.284  N2  6N2 10 
6N2 C1  C6  C 0 1 Y N N 106.159 17.069 21.665 4.389  -0.753 0.141  C1  6N2 11 
6N2 C13 C7  C 0 1 Y N N 105.684 17.304 20.376 3.595  0.362  0.338  C13 6N2 12 
6N2 C12 C8  C 0 1 Y N N 106.599 17.575 19.361 2.210  0.260  0.194  C12 6N2 13 
6N2 C3  C9  C 0 1 Y N N 108.447 17.217 20.894 2.447  -2.084 -0.349 C3  6N2 14 
6N2 N6  N6  N 0 1 Y N N 106.395 18.019 18.052 1.191  1.150  0.324  N6  6N2 15 
6N2 H1  H1  H 0 1 N N N 104.266 16.477 25.770 8.224  1.475  -0.053 H1  6N2 16 
6N2 H2  H2  H 0 1 N N N 103.320 16.438 24.319 8.263  -0.068 0.609  H2  6N2 17 
6N2 H3  H3  H 0 1 N N N 107.886 16.775 22.906 4.442  -2.840 -0.351 H3  6N2 18 
6N2 H4  H4  H 0 1 N N N 109.576 18.031 18.323 -0.406 -1.421 -0.442 H4  6N2 19 
6N2 H5  H5  H 0 1 N N N 108.261 17.956 15.851 -1.258 2.100  0.351  H5  6N2 20 
6N2 H6  H6  H 0 1 N N N 106.976 20.446 15.862 -2.337 -0.025 -1.164 H6  6N2 21 
6N2 H7  H7  H 0 1 N N N 107.375 19.319 14.522 -2.478 -0.439 0.561  H7  6N2 22 
6N2 H9  H9  H 0 1 N N N 106.504 16.903 25.666 6.214  2.307  -0.860 H9  6N2 23 
6N2 H10 H10 H 0 1 N N N 104.252 16.931 22.367 6.287  -1.406 0.625  H10 6N2 24 
6N2 H11 H11 H 0 1 N N N 104.625 17.276 20.168 4.045  1.308  0.602  H11 6N2 25 
6N2 H12 H12 H 0 1 N N N 109.509 17.142 21.077 2.007  -3.034 -0.613 H12 6N2 26 
6N2 C7  C10 C 0 1 N N N ?       ?      ?      -3.624 1.284  -0.038 C7  6N2 27 
6N2 N5  N7  N 0 1 N N N ?       ?      ?      -4.835 0.504  -0.324 N5  6N2 28 
6N2 C9  C11 C 0 1 N N N ?       ?      ?      -6.046 1.270  0.007  C9  6N2 29 
6N2 C10 C12 C 0 1 N N N ?       ?      ?      -7.282 0.445  -0.362 C10 6N2 30 
6N2 O1  O1  O 0 1 N N N ?       ?      ?      -7.232 -0.810 0.322  O1  6N2 31 
6N2 C14 C14 C 0 1 N N N ?       ?      ?      -6.066 -1.583 0.023  C14 6N2 32 
6N2 C15 C15 C 0 1 N N N ?       ?      ?      -4.818 -0.778 0.395  C15 6N2 33 
6N2 H8  H8  H 0 1 N N N ?       ?      ?      -3.683 1.689  0.972  H8  6N2 34 
6N2 H13 H13 H 0 1 N N N ?       ?      ?      -3.542 2.103  -0.753 H13 6N2 35 
6N2 H14 H14 H 0 1 N N N ?       ?      ?      -6.058 1.488  1.074  H14 6N2 36 
6N2 H15 H15 H 0 1 N N N ?       ?      ?      -6.051 2.204  -0.556 H15 6N2 37 
6N2 H16 H16 H 0 1 N N N ?       ?      ?      -8.181 0.985  -0.066 H16 6N2 38 
6N2 H17 H17 H 0 1 N N N ?       ?      ?      -7.297 0.273  -1.438 H17 6N2 39 
6N2 H18 H18 H 0 1 N N N ?       ?      ?      -6.087 -2.509 0.597  H18 6N2 40 
6N2 H19 H19 H 0 1 N N N ?       ?      ?      -6.046 -1.814 -1.042 H19 6N2 41 
6N2 H20 H20 H 0 1 N N N ?       ?      ?      -3.927 -1.340 0.116  H20 6N2 42 
6N2 H21 H21 H 0 1 N N N ?       ?      ?      -4.811 -0.593 1.469  H21 6N2 43 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
6N2 C6  N4  SING N N 1  
6N2 N4  C5  SING N N 2  
6N2 C5  N6  DOUB Y N 3  
6N2 C5  N3  SING Y N 4  
6N2 N6  C12 SING Y N 5  
6N2 N3  C4  SING Y N 6  
6N2 C12 C4  DOUB Y N 7  
6N2 C12 C13 SING Y N 8  
6N2 C4  C3  SING Y N 9  
6N2 C13 C1  DOUB Y N 10 
6N2 C3  C2  DOUB Y N 11 
6N2 C1  C2  SING Y N 12 
6N2 C1  N2  SING N N 13 
6N2 N2  C   SING N N 14 
6N2 C   N   DOUB N N 15 
6N2 C   N1  SING N N 16 
6N2 N1  H1  SING N N 17 
6N2 N1  H2  SING N N 18 
6N2 C2  H3  SING N N 19 
6N2 N3  H4  SING N N 20 
6N2 N4  H5  SING N N 21 
6N2 C6  H6  SING N N 22 
6N2 C6  H7  SING N N 23 
6N2 N   H9  SING N N 24 
6N2 N2  H10 SING N N 25 
6N2 C13 H11 SING N N 26 
6N2 C3  H12 SING N N 27 
6N2 C6  C7  SING N N 28 
6N2 C7  N5  SING N N 29 
6N2 N5  C9  SING N N 30 
6N2 C9  C10 SING N N 31 
6N2 C10 O1  SING N N 32 
6N2 O1  C14 SING N N 33 
6N2 C14 C15 SING N N 34 
6N2 C15 N5  SING N N 35 
6N2 C7  H8  SING N N 36 
6N2 C7  H13 SING N N 37 
6N2 C9  H14 SING N N 38 
6N2 C9  H15 SING N N 39 
6N2 C10 H16 SING N N 40 
6N2 C10 H17 SING N N 41 
6N2 C14 H18 SING N N 42 
6N2 C14 H19 SING N N 43 
6N2 C15 H20 SING N N 44 
6N2 C15 H21 SING N N 45 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
6N2 SMILES           ACDLabs              12.01 "N\C(=N)Nc3ccc2nc(NCCN1CCOCC1)nc2c3"                                                                                             
6N2 InChI            InChI                1.03  "InChI=1S/C14H21N7O/c15-13(16)18-10-1-2-11-12(9-10)20-14(19-11)17-3-4-21-5-7-22-8-6-21/h1-2,9H,3-8H2,(H4,15,16,18)(H2,17,19,20)" 
6N2 InChIKey         InChI                1.03  GUEKBGQUTZFSQX-UHFFFAOYSA-N                                                                                                      
6N2 SMILES_CANONICAL CACTVS               3.385 "NC(=N)Nc1ccc2[nH]c(NCCN3CCOCC3)nc2c1"                                                                                           
6N2 SMILES           CACTVS               3.385 "NC(=N)Nc1ccc2[nH]c(NCCN3CCOCC3)nc2c1"                                                                                           
6N2 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "[H]/N=C(/N)\Nc1ccc2c(c1)nc([nH]2)NCCN3CCOCC3"                                                                                   
6N2 SMILES           "OpenEye OEToolkits" 2.0.4 "c1cc2c(cc1NC(=N)N)nc([nH]2)NCCN3CCOCC3"                                                                                         
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
6N2 "SYSTEMATIC NAME" ACDLabs              12.01 "N-(2-{[2-(morpholin-4-yl)ethyl]amino}-1H-benzimidazol-5-yl)guanidine" 
6N2 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.4 "1-[2-(2-morpholin-4-ylethylamino)-1~{H}-benzimidazol-5-yl]guanidine"  
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
6N2 "Create component" 2016-05-10 RCSB 
6N2 "Initial release"  2017-05-24 RCSB 
# 
