data_6J2
# 
_chem_comp.id                                    6J2 
_chem_comp.name                                  "COENZYME F420-0" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C19 H22 N3 O12 P" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2016-04-12 
_chem_comp.pdbx_modified_date                    2016-07-08 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        515.365 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     6J2 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5JAB 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
6J2 C3I   C11 C 0 1 N N N 37.068 209.825 8.001 8.262  -0.966 1.089  C3I   6J2 1  
6J2 O3I   O7  O 0 1 N N N 37.648 209.301 8.966 7.590  -1.823 1.613  O3I   6J2 2  
6J2 C1I   C12 C 0 1 N N S 36.047 209.069 7.162 7.606  0.276  0.542  C1I   6J2 3  
6J2 C2I   C13 C 0 1 N N N 34.635 209.276 7.748 8.080  1.495  1.337  C2I   6J2 4  
6J2 O3P   O8  O 0 1 N N N 36.514 207.698 7.104 6.187  0.155  0.656  O3P   6J2 5  
6J2 P     P1  P 0 1 N N N 36.466 206.884 5.690 5.199  0.201  -0.614 P     6J2 6  
6J2 O1P   O9  O 0 1 N N N 37.218 207.874 4.770 5.436  1.445  -1.380 O1P   6J2 7  
6J2 O2P   O10 O 0 1 N N N 37.088 205.653 6.140 5.479  -1.072 -1.559 O2P   6J2 8  
6J2 "O5'" O11 O 0 1 N N N 34.998 206.860 5.131 3.671  0.167  -0.107 "O5'" 6J2 9  
6J2 "C5'" C14 C 0 1 N N N 34.466 207.396 3.986 2.555  0.300  -0.989 "C5'" 6J2 10 
6J2 "C4'" C15 C 0 1 N N R 33.155 206.736 3.623 1.256  0.224  -0.184 "C4'" 6J2 11 
6J2 "O4'" O12 O 0 1 N N N 33.357 205.310 3.382 1.176  1.345  0.698  "O4'" 6J2 12 
6J2 "C3'" C16 C 0 1 N N S 32.150 207.045 4.726 0.061  0.241  -1.139 "C3'" 6J2 13 
6J2 "O3'" O13 O 0 1 N N N 31.567 208.308 4.413 0.141  -0.880 -2.022 "O3'" 6J2 14 
6J2 "C2'" C17 C 0 1 N N S 31.022 206.007 4.752 -1.237 0.165  -0.334 "C2'" 6J2 15 
6J2 "O2'" O14 O 0 1 N N N 30.060 206.323 5.746 -1.317 1.286  0.548  "O2'" 6J2 16 
6J2 "C1'" C18 C 0 1 N N N 30.294 205.913 3.446 -2.432 0.182  -1.289 "C1'" 6J2 17 
6J2 N10   N4  N 0 1 N N N 29.383 204.753 3.334 -3.675 0.109  -0.518 N10   6J2 18 
6J2 C9A   C19 C 0 1 Y N N 27.996 204.748 3.589 -4.289 1.270  -0.096 C9A   6J2 19 
6J2 C9    C20 C 0 1 Y N N 27.329 205.928 3.958 -3.723 2.502  -0.406 C9    6J2 20 
6J2 C8    C21 C 0 1 Y N N 25.996 205.913 4.183 -4.335 3.669  0.016  C8    6J2 21 
6J2 O8M   O15 O 0 1 N N N 25.391 207.088 4.529 -3.780 4.868  -0.288 O8M   6J2 22 
6J2 C7    C22 C 0 1 Y N N 25.265 204.760 4.035 -5.521 3.621  0.752  C7    6J2 23 
6J2 C6    C23 C 0 1 Y N N 25.832 203.556 3.638 -6.092 2.427  1.067  C6    6J2 24 
6J2 C5A   C24 C 0 1 Y N N 27.229 203.522 3.403 -5.487 1.227  0.648  C5A   6J2 25 
6J2 C5    C25 C 0 1 N N N 27.827 202.300 3.028 -6.078 -0.014 0.974  C5    6J2 26 
6J2 C10   C26 C 0 1 N N N 29.995 203.529 3.019 -4.221 -1.105 -0.227 C10   6J2 27 
6J2 N1    N5  N 0 1 N N N 31.311 203.511 2.869 -3.658 -2.239 -0.623 N1    6J2 28 
6J2 C4A   C27 C 0 1 N N N 29.227 202.290 2.921 -5.462 -1.176 0.550  C4A   6J2 29 
6J2 C4    C28 C 0 1 N N N 30.019 201.044 2.700 -6.013 -2.508 0.840  C4    6J2 30 
6J2 O4    O16 O 0 1 N N N 29.381 199.985 2.698 -7.040 -2.645 1.478  O4    6J2 31 
6J2 N3    N6  N 0 1 N N N 31.373 201.188 2.543 -5.330 -3.576 0.365  N3    6J2 32 
6J2 C2    C29 C 0 1 N N N 31.985 202.378 2.588 -4.197 -3.419 -0.334 C2    6J2 33 
6J2 O2    O17 O 0 1 N N N 33.217 202.504 2.400 -3.629 -4.421 -0.735 O2    6J2 34 
6J2 H16   H16 H 0 1 N N N 36.057 209.494 6.148 7.878  0.398  -0.506 H16   6J2 35 
6J2 H17   H17 H 0 1 N N N 34.389 210.348 7.742 7.808  1.373  2.385  H17   6J2 36 
6J2 H18   H18 H 0 1 N N N 33.901 208.728 7.139 9.162  1.587  1.250  H18   6J2 37 
6J2 H19   H19 H 0 1 N N N 34.608 208.899 8.781 7.605  2.393  0.941  H19   6J2 38 
6J2 H20   H20 H 0 1 N N N 37.967 205.593 5.784 5.342  -1.924 -1.122 H20   6J2 39 
6J2 H21   H21 H 0 1 N N N 35.179 207.254 3.160 2.609  1.261  -1.501 H21   6J2 40 
6J2 H22   H22 H 0 1 N N N 34.294 208.471 4.141 2.574  -0.505 -1.724 H22   6J2 41 
6J2 H23   H23 H 0 1 N N N 32.788 207.200 2.695 1.243  -0.698 0.398  H23   6J2 42 
6J2 H24   H24 H 0 1 N N N 32.748 205.012 2.717 1.183  2.201  0.248  H24   6J2 43 
6J2 H25   H25 H 0 1 N N N 32.658 207.068 5.701 0.075  1.163  -1.721 H25   6J2 44 
6J2 H26   H26 H 0 1 N N N 30.931 208.538 5.080 0.134  -1.736 -1.571 H26   6J2 45 
6J2 H27   H27 H 0 1 N N N 31.468 205.026 4.972 -1.250 -0.757 0.248  H27   6J2 46 
6J2 H28   H28 H 0 1 N N N 30.488 206.391 6.591 -1.310 2.142  0.098  H28   6J2 47 
6J2 H29   H29 H 0 1 N N N 31.040 205.843 2.641 -2.419 1.104  -1.871 H29   6J2 48 
6J2 H30   H30 H 0 1 N N N 29.700 206.830 3.317 -2.371 -0.673 -1.962 H30   6J2 49 
6J2 H31   H31 H 0 1 N N N 27.882 206.850 4.062 -2.806 2.548  -0.975 H31   6J2 50 
6J2 H32   H32 H 0 1 N N N 24.461 206.940 4.658 -4.085 5.242  -1.126 H32   6J2 51 
6J2 H33   H33 H 0 1 N N N 24.204 204.791 4.236 -5.988 4.540  1.075  H33   6J2 52 
6J2 H34   H34 H 0 1 N N N 25.226 202.671 3.512 -7.009 2.399  1.636  H34   6J2 53 
6J2 H35   H35 H 0 1 N N N 27.237 201.417 2.833 -6.994 -0.054 1.544  H35   6J2 54 
6J2 H37   H37 H 0 1 N N N 31.927 200.370 2.388 -5.664 -4.471 0.537  H37   6J2 55 
6J2 OXT   OXT O 0 1 N Y N 37.331 210.984 7.485 9.592  -1.117 1.000  OXT   6J2 56 
6J2 HXT   HXT H 0 1 N Y N 38.048 211.387 7.960 9.967  -1.929 1.368  HXT   6J2 57 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
6J2 O2    C2    DOUB N N 1  
6J2 N3    C2    SING N N 2  
6J2 N3    C4    SING N N 3  
6J2 C2    N1    SING N N 4  
6J2 O4    C4    DOUB N N 5  
6J2 C4    C4A   SING N N 6  
6J2 N1    C10   DOUB N N 7  
6J2 C4A   C10   SING N N 8  
6J2 C4A   C5    DOUB N N 9  
6J2 C10   N10   SING N N 10 
6J2 C5    C5A   SING N N 11 
6J2 N10   "C1'" SING N N 12 
6J2 N10   C9A   SING N N 13 
6J2 "O4'" "C4'" SING N N 14 
6J2 C5A   C9A   DOUB Y N 15 
6J2 C5A   C6    SING Y N 16 
6J2 "C1'" "C2'" SING N N 17 
6J2 C9A   C9    SING Y N 18 
6J2 "C4'" "C5'" SING N N 19 
6J2 "C4'" "C3'" SING N N 20 
6J2 C6    C7    DOUB Y N 21 
6J2 C9    C8    DOUB Y N 22 
6J2 "C5'" "O5'" SING N N 23 
6J2 C7    C8    SING Y N 24 
6J2 C8    O8M   SING N N 25 
6J2 "O3'" "C3'" SING N N 26 
6J2 "C3'" "C2'" SING N N 27 
6J2 "C2'" "O2'" SING N N 28 
6J2 O1P   P     DOUB N N 29 
6J2 "O5'" P     SING N N 30 
6J2 P     O2P   SING N N 31 
6J2 P     O3P   SING N N 32 
6J2 O3P   C1I   SING N N 33 
6J2 C1I   C2I   SING N N 34 
6J2 C1I   C3I   SING N N 35 
6J2 C3I   O3I   DOUB N N 36 
6J2 C1I   H16   SING N N 37 
6J2 C2I   H17   SING N N 38 
6J2 C2I   H18   SING N N 39 
6J2 C2I   H19   SING N N 40 
6J2 O2P   H20   SING N N 41 
6J2 "C5'" H21   SING N N 42 
6J2 "C5'" H22   SING N N 43 
6J2 "C4'" H23   SING N N 44 
6J2 "O4'" H24   SING N N 45 
6J2 "C3'" H25   SING N N 46 
6J2 "O3'" H26   SING N N 47 
6J2 "C2'" H27   SING N N 48 
6J2 "O2'" H28   SING N N 49 
6J2 "C1'" H29   SING N N 50 
6J2 "C1'" H30   SING N N 51 
6J2 C9    H31   SING N N 52 
6J2 O8M   H32   SING N N 53 
6J2 C7    H33   SING N N 54 
6J2 C6    H34   SING N N 55 
6J2 C5    H35   SING N N 56 
6J2 N3    H37   SING N N 57 
6J2 C3I   OXT   SING N N 58 
6J2 OXT   HXT   SING N N 59 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
6J2 SMILES           ACDLabs              12.01 "C(=O)(O)C(C)OP(O)(=O)OCC(C(C(O)CN2c1cc(O)ccc1C=C3C2=NC(NC3=O)=O)O)O" 
6J2 InChI            InChI                1.03  
"InChI=1S/C19H22N3O12P/c1-8(18(28)29)34-35(31,32)33-7-14(25)15(26)13(24)6-22-12-5-10(23)3-2-9(12)4-11-16(22)20-19(30)21-17(11)27/h2-5,8,13-15,23-26H,6-7H2,1H3,(H,28,29)(H,31,32)(H,21,27,30)/t8-,13-,14+,15-/m0/s1" 
6J2 InChIKey         InChI                1.03  QNHKLTYSDLGJSR-GQPBWUKJSA-N 
6J2 SMILES_CANONICAL CACTVS               3.385 "C[C@H](O[P](O)(=O)OC[C@@H](O)[C@@H](O)[C@@H](O)CN1c2cc(O)ccc2C=C3C(=O)NC(=O)N=C13)C(O)=O" 
6J2 SMILES           CACTVS               3.385 "C[CH](O[P](O)(=O)OC[CH](O)[CH](O)[CH](O)CN1c2cc(O)ccc2C=C3C(=O)NC(=O)N=C13)C(O)=O" 
6J2 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "C[C@@H](C(=O)O)OP(=O)(O)OC[C@H]([C@H]([C@H](CN1c2cc(ccc2C=C3C1=NC(=O)NC3=O)O)O)O)O" 
6J2 SMILES           "OpenEye OEToolkits" 2.0.4 "CC(C(=O)O)OP(=O)(O)OCC(C(C(CN1c2cc(ccc2C=C3C1=NC(=O)NC3=O)O)O)O)O" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
6J2 "SYSTEMATIC NAME" ACDLabs              12.01 "5-O-[(S)-[(1S)-1-carboxyethoxy](hydroxy)phosphoryl]-1-deoxy-1-(8-hydroxy-2,4-dioxo-3,4-dihydropyrimido[4,5-b]quinolin-10(2H)-yl)-D-ribitol"                           
6J2 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.4 "(2~{S})-2-[oxidanyl-[(2~{R},3~{S},4~{S})-2,3,4-tris(oxidanyl)-5-[8-oxidanyl-2,4-bis(oxidanylidene)pyrimido[4,5-b]quinolin-10-yl]pentoxy]phosphoryl]oxypropanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
6J2 "Create component" 2016-04-12 RCSB 
6J2 "Modify name"      2016-04-13 RCSB 
6J2 "Initial release"  2016-07-13 RCSB 
# 
