data_YA1
# 
_chem_comp.id                                    YA1 
_chem_comp.name                                  "(1R,3R,7E,17beta)-17-[(2R,3R)-3-butyl-6-hydroxy-6-methylheptan-2-yl]-2-methylidene-9,10-secoestra-5,7-diene-1,3-diol" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C31 H52 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2014-04-17 
_chem_comp.pdbx_modified_date                    2014-06-06 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        472.743 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     YA1 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3WT5 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
YA1 O2  O2  O 0 1 N N N 12.599 8.966  55.823 -6.156 -1.619 -2.751 O2  YA1 1  
YA1 C3  C3  C 0 1 N N R 11.481 8.899  54.907 -6.118 -0.640 -1.712 C3  YA1 2  
YA1 C2  C2  C 0 1 N N N 11.646 7.660  54.068 -7.391 -0.711 -0.900 C2  YA1 3  
YA1 C9  C9  C 0 1 N N N 11.850 7.820  52.810 -8.364 -1.513 -1.255 C9  YA1 4  
YA1 C1  C1  C 0 1 N N R 11.665 6.365  54.765 -7.522 0.161  0.328  C1  YA1 5  
YA1 O1  O1  O 0 1 N N N 11.773 5.279  53.815 -7.515 1.537  -0.057 O1  YA1 6  
YA1 C6  C6  C 0 1 N N N 10.443 6.207  55.617 -6.333 -0.120 1.256  C6  YA1 7  
YA1 C4  C4  C 0 1 N N N 10.152 8.794  55.631 -4.929 -0.920 -0.784 C4  YA1 8  
YA1 C5  C5  C 0 1 N N N 10.001 7.468  56.324 -5.060 -0.049 0.445  C5  YA1 9  
YA1 C10 C10 C 0 1 N N N 9.383  7.439  57.504 -4.074 0.766  0.804  C10 YA1 10 
YA1 C11 C11 C 0 1 N N N 9.128  6.202  58.267 -2.790 0.728  0.086  C11 YA1 11 
YA1 C12 C12 C 0 1 N N N 8.122  6.132  59.157 -1.770 1.467  0.509  C12 YA1 12 
YA1 C13 C13 C 0 1 N N N 7.192  7.276  59.478 -1.869 2.370  1.730  C13 YA1 13 
YA1 C14 C14 C 0 1 N N N 5.688  6.808  59.449 -0.702 2.120  2.683  C14 YA1 14 
YA1 C15 C15 C 0 1 N N N 5.437  5.459  60.105 0.647  2.117  1.945  C15 YA1 15 
YA1 C17 C17 C 0 1 N N S 7.822  4.869  59.876 -0.437 1.465  -0.178 C17 YA1 16 
YA1 C16 C16 C 0 1 N N R 6.403  4.417  59.593 0.591  1.030  0.897  C16 YA1 17 
YA1 C23 C23 C 0 1 N N N 6.156  4.245  58.117 0.116  -0.270 1.550  C23 YA1 18 
YA1 C18 C18 C 0 1 N N N 8.679  3.653  59.694 -0.222 0.403  -1.258 C18 YA1 19 
YA1 C19 C19 C 0 1 N N N 7.764  2.523  60.212 1.326  0.262  -1.298 C19 YA1 20 
YA1 C20 C20 C 0 1 N N R 6.366  3.058  60.337 1.843  0.742  0.084  C20 YA1 21 
YA1 C21 C21 C 0 1 N N R 5.276  2.069  59.846 2.669  -0.360 0.752  C21 YA1 22 
YA1 C22 C22 C 0 1 N N N 3.879  2.715  59.760 3.201  0.146  2.095  C22 YA1 23 
YA1 C24 C24 C 0 1 N N R 5.221  0.817  60.699 3.843  -0.737 -0.153 C24 YA1 24 
YA1 C31 C31 C 0 1 N N N 4.093  -0.140 60.226 4.591  -1.927 0.452  C31 YA1 25 
YA1 C32 C32 C 0 1 N N N 4.237  -0.506 58.756 3.679  -3.155 0.457  C32 YA1 26 
YA1 C33 C33 C 0 1 N N N 5.348  -1.481 58.600 4.385  -4.312 1.166  C33 YA1 27 
YA1 C34 C34 C 0 1 N N N 5.209  -2.317 57.329 3.472  -5.540 1.172  C34 YA1 28 
YA1 C25 C25 C 0 1 N N N 4.975  1.119  62.179 4.794  0.454  -0.278 C25 YA1 29 
YA1 C26 C26 C 0 1 N N N 4.912  -0.179 62.997 5.901  0.120  -1.280 C26 YA1 30 
YA1 C27 C27 C 0 1 N N N 5.038  -0.022 64.535 6.853  1.311  -1.405 C27 YA1 31 
YA1 C29 C29 C 0 1 N N N 6.435  0.415  64.899 7.475  1.613  -0.040 C29 YA1 32 
YA1 C28 C28 C 0 1 N N N 3.973  0.952  65.055 7.960  0.977  -2.407 C28 YA1 33 
YA1 O3  O3  O 0 1 N N N 4.843  -1.313 65.135 6.127  2.455  -1.860 O3  YA1 34 
YA1 H1  H1  H 0 1 N N N 12.518 9.742  56.366 -6.885 -1.501 -3.376 H1  YA1 35 
YA1 H2  H2  H 0 1 N N N 11.470 9.784  54.254 -6.014 0.354  -2.149 H2  YA1 36 
YA1 H3  H3  H 0 1 N N N 11.897 8.815  52.393 -9.270 -1.556 -0.668 H3  YA1 37 
YA1 H4  H4  H 0 1 N N N 11.974 6.959  52.169 -8.260 -2.131 -2.134 H4  YA1 38 
YA1 H5  H5  H 0 1 N N N 12.544 6.342  55.426 -8.453 -0.072 0.845  H5  YA1 39 
YA1 H6  H6  H 0 1 N N N 11.784 4.451  54.280 -8.233 1.781  -0.657 H6  YA1 40 
YA1 H7  H7  H 0 1 N N N 9.618  5.867  54.974 -6.304 0.628  2.049  H7  YA1 41 
YA1 H8  H8  H 0 1 N N N 10.653 5.442  56.379 -6.436 -1.114 1.691  H8  YA1 42 
YA1 H9  H9  H 0 1 N N N 10.089 9.597  56.380 -4.935 -1.970 -0.490 H9  YA1 43 
YA1 H10 H10 H 0 1 N N N 9.338  8.910  54.901 -3.998 -0.687 -1.300 H10 YA1 44 
YA1 H11 H11 H 0 1 N N N 9.049  8.375  57.927 -4.214 1.455  1.624  H11 YA1 45 
YA1 H12 H12 H 0 1 N N N 9.759  5.340  58.108 -2.678 0.101  -0.786 H12 YA1 46 
YA1 H13 H13 H 0 1 N N N 7.429  7.662  60.481 -1.853 3.412  1.408  H13 YA1 47 
YA1 H14 H14 H 0 1 N N N 7.334  8.074  58.735 -2.806 2.170  2.250  H14 YA1 48 
YA1 H15 H15 H 0 1 N N N 5.083  7.563  59.972 -0.690 2.902  3.443  H15 YA1 49 
YA1 H16 H16 H 0 1 N N N 5.368  6.745  58.399 -0.842 1.156  3.171  H16 YA1 50 
YA1 H17 H17 H 0 1 N N N 5.561  5.560  61.193 0.809  3.084  1.467  H17 YA1 51 
YA1 H18 H18 H 0 1 N N N 4.409  5.137  59.882 1.454  1.913  2.649  H18 YA1 52 
YA1 H19 H19 H 0 1 N N N 7.855  5.109  60.949 -0.200 2.458  -0.561 H19 YA1 53 
YA1 H20 H20 H 0 1 N N N 5.119  3.917  57.954 0.112  -1.068 0.808  H20 YA1 54 
YA1 H21 H21 H 0 1 N N N 6.323  5.203  57.603 0.790  -0.534 2.364  H21 YA1 55 
YA1 H22 H22 H 0 1 N N N 6.847  3.489  57.715 -0.891 -0.133 1.942  H22 YA1 56 
YA1 H23 H23 H 0 1 N N N 8.937  3.503  58.635 -0.689 -0.540 -0.971 H23 YA1 57 
YA1 H24 H24 H 0 1 N N N 9.601  3.723  60.290 -0.603 0.747  -2.220 H24 YA1 58 
YA1 H25 H25 H 0 1 N N N 7.777  1.682  59.504 1.603  -0.778 -1.472 H25 YA1 59 
YA1 H26 H26 H 0 1 N N N 8.119  2.180  61.195 1.740  0.896  -2.082 H26 YA1 60 
YA1 H27 H27 H 0 1 N N N 6.172  3.266  61.400 2.439  1.648  -0.028 H27 YA1 61 
YA1 H28 H28 H 0 1 N N N 5.555  1.762  58.827 2.041  -1.235 0.917  H28 YA1 62 
YA1 H29 H29 H 0 1 N N N 3.151  1.970  59.408 3.748  1.076  1.941  H29 YA1 63 
YA1 H30 H30 H 0 1 N N N 3.581  3.077  60.755 2.367  0.322  2.773  H30 YA1 64 
YA1 H31 H31 H 0 1 N N N 3.908  3.560  59.056 3.869  -0.601 2.525  H31 YA1 65 
YA1 H32 H32 H 0 1 N N N 6.181  0.287  60.607 3.468  -1.008 -1.140 H32 YA1 66 
YA1 H33 H33 H 0 1 N N N 3.122  0.354  60.376 5.480  -2.137 -0.142 H33 YA1 67 
YA1 H34 H34 H 0 1 N N N 4.133  -1.060 60.827 4.886  -1.689 1.474  H34 YA1 68 
YA1 H35 H35 H 0 1 N N N 4.458  0.399  58.172 2.753  -2.917 0.982  H35 YA1 69 
YA1 H36 H36 H 0 1 N N N 3.300  -0.956 58.396 3.451  -3.442 -0.569 H36 YA1 70 
YA1 H37 H37 H 0 1 N N N 5.352  -2.156 59.469 5.310  -4.549 0.642  H37 YA1 71 
YA1 H38 H38 H 0 1 N N N 6.299  -0.930 58.559 4.613  -4.024 2.193  H38 YA1 72 
YA1 H39 H39 H 0 1 N N N 6.051  -3.021 57.258 2.547  -5.303 1.696  H39 YA1 73 
YA1 H40 H40 H 0 1 N N N 4.264  -2.879 57.361 3.244  -5.827 0.145  H40 YA1 74 
YA1 H41 H41 H 0 1 N N N 5.211  -1.653 56.452 3.975  -6.365 1.677  H41 YA1 75 
YA1 H42 H42 H 0 1 N N N 5.794  1.746  62.560 4.241  1.326  -0.625 H42 YA1 76 
YA1 H43 H43 H 0 1 N N N 4.022  1.658  62.284 5.238  0.669  0.695  H43 YA1 77 
YA1 H44 H44 H 0 1 N N N 3.947  -0.663 62.786 6.455  -0.752 -0.932 H44 YA1 78 
YA1 H45 H45 H 0 1 N N N 5.731  -0.831 62.657 5.458  -0.095 -2.252 H45 YA1 79 
YA1 H46 H46 H 0 1 N N N 6.513  0.523  65.991 8.028  0.740  0.308  H46 YA1 80 
YA1 H47 H47 H 0 1 N N N 7.157  -0.339 64.553 8.153  2.462  -0.129 H47 YA1 81 
YA1 H48 H48 H 0 1 N N N 6.654  1.380  64.418 6.686  1.851  0.674  H48 YA1 82 
YA1 H49 H49 H 0 1 N N N 4.071  1.056  66.146 7.517  0.763  -3.379 H49 YA1 83 
YA1 H50 H50 H 0 1 N N N 4.111  1.934  64.579 8.638  1.826  -2.496 H50 YA1 84 
YA1 H51 H51 H 0 1 N N N 2.972  0.565  64.813 8.513  0.105  -2.059 H51 YA1 85 
YA1 H52 H52 H 0 1 N N N 4.916  -1.238 66.079 5.705  2.335  -2.722 H52 YA1 86 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
YA1 C9  C2  DOUB N N 1  
YA1 O1  C1  SING N N 2  
YA1 C2  C1  SING N N 3  
YA1 C2  C3  SING N N 4  
YA1 C1  C6  SING N N 5  
YA1 C3  C4  SING N N 6  
YA1 C3  O2  SING N N 7  
YA1 C6  C5  SING N N 8  
YA1 C4  C5  SING N N 9  
YA1 C5  C10 DOUB N N 10 
YA1 C34 C33 SING N N 11 
YA1 C10 C11 SING N N 12 
YA1 C23 C16 SING N N 13 
YA1 C11 C12 DOUB N E 14 
YA1 C33 C32 SING N N 15 
YA1 C32 C31 SING N N 16 
YA1 C12 C13 SING N N 17 
YA1 C12 C17 SING N N 18 
YA1 C14 C13 SING N N 19 
YA1 C14 C15 SING N N 20 
YA1 C16 C17 SING N N 21 
YA1 C16 C15 SING N N 22 
YA1 C16 C20 SING N N 23 
YA1 C18 C17 SING N N 24 
YA1 C18 C19 SING N N 25 
YA1 C22 C21 SING N N 26 
YA1 C21 C20 SING N N 27 
YA1 C21 C24 SING N N 28 
YA1 C19 C20 SING N N 29 
YA1 C31 C24 SING N N 30 
YA1 C24 C25 SING N N 31 
YA1 C25 C26 SING N N 32 
YA1 C26 C27 SING N N 33 
YA1 C27 C29 SING N N 34 
YA1 C27 C28 SING N N 35 
YA1 C27 O3  SING N N 36 
YA1 O2  H1  SING N N 37 
YA1 C3  H2  SING N N 38 
YA1 C9  H3  SING N N 39 
YA1 C9  H4  SING N N 40 
YA1 C1  H5  SING N N 41 
YA1 O1  H6  SING N N 42 
YA1 C6  H7  SING N N 43 
YA1 C6  H8  SING N N 44 
YA1 C4  H9  SING N N 45 
YA1 C4  H10 SING N N 46 
YA1 C10 H11 SING N N 47 
YA1 C11 H12 SING N N 48 
YA1 C13 H13 SING N N 49 
YA1 C13 H14 SING N N 50 
YA1 C14 H15 SING N N 51 
YA1 C14 H16 SING N N 52 
YA1 C15 H17 SING N N 53 
YA1 C15 H18 SING N N 54 
YA1 C17 H19 SING N N 55 
YA1 C23 H20 SING N N 56 
YA1 C23 H21 SING N N 57 
YA1 C23 H22 SING N N 58 
YA1 C18 H23 SING N N 59 
YA1 C18 H24 SING N N 60 
YA1 C19 H25 SING N N 61 
YA1 C19 H26 SING N N 62 
YA1 C20 H27 SING N N 63 
YA1 C21 H28 SING N N 64 
YA1 C22 H29 SING N N 65 
YA1 C22 H30 SING N N 66 
YA1 C22 H31 SING N N 67 
YA1 C24 H32 SING N N 68 
YA1 C31 H33 SING N N 69 
YA1 C31 H34 SING N N 70 
YA1 C32 H35 SING N N 71 
YA1 C32 H36 SING N N 72 
YA1 C33 H37 SING N N 73 
YA1 C33 H38 SING N N 74 
YA1 C34 H39 SING N N 75 
YA1 C34 H40 SING N N 76 
YA1 C34 H41 SING N N 77 
YA1 C25 H42 SING N N 78 
YA1 C25 H43 SING N N 79 
YA1 C26 H44 SING N N 80 
YA1 C26 H45 SING N N 81 
YA1 C29 H46 SING N N 82 
YA1 C29 H47 SING N N 83 
YA1 C29 H48 SING N N 84 
YA1 C28 H49 SING N N 85 
YA1 C28 H50 SING N N 86 
YA1 C28 H51 SING N N 87 
YA1 O3  H52 SING N N 88 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
YA1 SMILES           ACDLabs              12.01 "OC3C(=C)\C(O)C/C(=C\C=C1/CCCC2(C)C(C(C)C(CCCC)CCC(O)(C)C)CCC12)C3" 
YA1 InChI            InChI                1.03  
"InChI=1S/C31H52O3/c1-7-8-10-24(16-18-30(4,5)34)21(2)26-14-15-27-25(11-9-17-31(26,27)6)13-12-23-19-28(32)22(3)29(33)20-23/h12-13,21,24,26-29,32-34H,3,7-11,14-20H2,1-2,4-6H3/b25-13+/t21-,24-,26-,27+,28-,29-,31-/m1/s1" 
YA1 InChIKey         InChI                1.03  RSXHMKSDJHHTDU-PJSVQGINSA-N 
YA1 SMILES_CANONICAL CACTVS               3.385 "CCCC[C@H](CCC(C)(C)O)[C@@H](C)[C@H]1CC[C@H]2C(/CCC[C@]12C)=C/C=C3C[C@@H](O)C(=C)[C@H](O)C3" 
YA1 SMILES           CACTVS               3.385 "CCCC[CH](CCC(C)(C)O)[CH](C)[CH]1CC[CH]2C(CCC[C]12C)=CC=C3C[CH](O)C(=C)[CH](O)C3" 
YA1 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CCCC[C@H](CCC(C)(C)O)[C@@H](C)[C@H]1CC[C@@H]\2[C@@]1(CCC/C2=C\C=C3C[C@H](C(=C)[C@@H](C3)O)O)C" 
YA1 SMILES           "OpenEye OEToolkits" 1.7.6 "CCCCC(CCC(C)(C)O)C(C)C1CCC2C1(CCCC2=CC=C3CC(C(=C)C(C3)O)O)C" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
YA1 "SYSTEMATIC NAME" ACDLabs              12.01 "(1R,3R,7E,17beta)-17-[(2R,3R)-3-butyl-6-hydroxy-6-methylheptan-2-yl]-2-methylidene-9,10-secoestra-5,7-diene-1,3-diol"                                                                   
YA1 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(1R,3R)-5-[(2E)-2-[(1R,3aS,7aR)-1-[(2R,3R)-3-butyl-6-methyl-6-oxidanyl-heptan-2-yl]-7a-methyl-2,3,3a,5,6,7-hexahydro-1H-inden-4-ylidene]ethylidene]-2-methylidene-cyclohexane-1,3-diol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
YA1 "Create component" 2014-04-17 PDBJ 
YA1 "Initial release"  2014-06-11 RCSB 
# 
