data_O21
# 
_chem_comp.id                                    O21 
_chem_comp.name                                  "N-{2-[(6-{[(2,6-dichloro-3,5-dimethoxyphenyl)carbamoyl][3-(4-methylpiperazin-1-yl)propyl]amino}pyrimidin-4-yl)amino]phenyl}prop-2-enamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C30 H36 Cl2 N8 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2019-06-04 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        643.564 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     O21 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6P69 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
O21 C10 C1  C  0 1 N N N N N N -18.301 -22.240 11.335 0.279   -1.791 -0.494 C10 O21 1  
O21 C11 C2  C  0 1 N N N N N N -19.102 -21.061 10.716 0.105   -3.077 -1.304 C11 O21 2  
O21 C12 C3  C  0 1 N N N N N N -19.315 -18.726 10.527 -0.280  -5.459 -1.103 C12 O21 3  
O21 C13 C4  C  0 1 N N N N N N -18.683 -17.434 10.990 -0.330  -6.622 -0.109 C13 O21 4  
O21 N4  N1  N  0 1 N N N N N N -19.157 -17.183 12.381 0.990   -6.784 0.518  N4  O21 5  
O21 C14 C5  C  0 1 N N N N N N -18.516 -16.095 13.136 1.004   -7.940 1.424  C14 O21 6  
O21 C15 C6  C  0 1 N N N N N N -18.699 -18.332 13.221 1.389   -5.557 1.222  C15 O21 7  
O21 C16 C7  C  0 1 N N N N N N -19.212 -19.660 12.740 1.438   -4.394 0.228  C16 O21 8  
O21 N3  N2  N  0 1 N N N N N N -18.756 -19.769 11.353 0.119   -4.233 -0.398 N3  O21 9  
O21 C9  C8  C  0 1 N N N N N N -16.805 -21.892 11.119 0.264   -0.587 -1.438 C9  O21 10 
O21 N2  N3  N  0 1 N N N N N N -15.962 -22.989 11.677 0.431   0.644  -0.662 N2  O21 11 
O21 C8  C9  C  0 1 N N N N N N -15.488 -22.850 12.965 1.666   1.130  -0.426 C8  O21 12 
O21 O3  O1  O  0 1 N N N N N N -15.705 -21.812 13.550 1.802   2.199  0.136  O3  O21 13 
O21 N1  N4  N  0 1 N N N N N N -14.666 -23.741 13.546 2.751   0.430  -0.813 N1  O21 14 
O21 C7  C10 C  0 1 Y N N N N N -14.160 -23.644 14.818 4.032   0.875  -0.466 C7  O21 15 
O21 C30 C11 C  0 1 Y N N N N N -14.742 -24.421 15.804 4.417   2.178  -0.754 C30 O21 16 
O21 CL2 CL1 CL 0 0 N N N N N N -16.127 -25.239 15.476 3.309   3.256  -1.545 CL2 O21 17 
O21 C6  C12 C  0 1 Y N N N N N -13.002 -22.933 15.111 4.917   0.016  0.172  C6  O21 18 
O21 CL1 CL2 CL 0 0 N N N N N N -12.177 -21.965 13.893 4.436   -1.611 0.540  CL1 O21 19 
O21 C4  C13 C  0 1 Y N N N N N -12.492 -22.986 16.408 6.186   0.458  0.516  C4  O21 20 
O21 O2  O2  O  0 1 N N N N N N -11.405 -22.250 16.591 7.053   -0.382 1.141  O2  O21 21 
O21 C5  C14 C  0 1 N N N N N N -10.826 -22.331 17.917 8.343   0.139  1.465  C5  O21 22 
O21 C3  C15 C  0 1 Y N N N N N -13.108 -23.734 17.433 6.572   1.758  0.222  C3  O21 23 
O21 C2  C16 C  0 1 Y N N N N N -14.258 -24.455 17.080 5.687   2.618  -0.410 C2  O21 24 
O21 O1  O3  O  0 1 N N N N N N -14.951 -25.266 17.903 6.063   3.894  -0.692 O1  O21 25 
O21 C1  C17 C  0 1 N N N N N N -14.424 -25.476 19.216 7.385   4.279  -0.309 C1  O21 26 
O21 C17 C18 C  0 1 Y N N N N N -15.797 -24.146 10.990 -0.684  1.312  -0.168 C17 O21 27 
O21 C18 C19 C  0 1 Y N N N N N -16.394 -24.387 9.744  -1.944  0.728  -0.238 C18 O21 28 
O21 N8  N5  N  0 1 Y N N N N N -15.149 -25.172 11.537 -0.561  2.517  0.383  N8  O21 29 
O21 C29 C20 C  0 1 Y N N N N N -15.048 -26.376 10.845 -1.612  3.157  0.854  C29 O21 30 
O21 N7  N6  N  0 1 Y N N N N N -15.635 -26.572 9.568  -2.823  2.640  0.802  N7  O21 31 
O21 C19 C21 C  0 1 Y N N N N N -16.325 -25.571 9.025  -3.029  1.435  0.275  C19 O21 32 
O21 N5  N7  N  0 1 N N N N N N -16.934 -25.799 7.818  -4.306  0.898  0.224  N5  O21 33 
O21 C20 C22 C  0 1 Y N N N N N -17.253 -24.846 6.906  -5.367  1.554  0.859  C20 O21 34 
O21 C21 C23 C  0 1 Y N N N N N -18.164 -23.801 7.173  -5.129  2.344  1.975  C21 O21 35 
O21 C22 C24 C  0 1 Y N N N N N -18.510 -22.842 6.217  -6.178  2.991  2.600  C22 O21 36 
O21 C23 C25 C  0 1 Y N N N N N -17.967 -22.924 4.954  -7.466  2.854  2.118  C23 O21 37 
O21 C24 C26 C  0 1 Y N N N N N -17.092 -23.979 4.682  -7.713  2.069  1.007  C24 O21 38 
O21 C25 C27 C  0 1 Y N N N N N -16.704 -24.947 5.636  -6.666  1.421  0.369  C25 O21 39 
O21 N6  N8  N  0 1 N N N N N N -15.900 -26.023 5.374  -6.913  0.625  -0.756 N6  O21 40 
O21 C26 C28 C  0 1 N N N N N N -14.957 -26.026 4.404  -8.105  0.011  -0.898 C26 O21 41 
O21 O4  O4  O  0 1 N N N N N N -14.632 -25.041 3.748  -8.993  0.212  -0.092 O4  O21 42 
O21 C27 C29 C  0 1 N N N N N N -14.203 -27.356 4.107  -8.330  -0.903 -2.028 C27 O21 43 
O21 C28 C30 C  0 1 N N N N N N -13.478 -28.051 5.308  -9.506  -1.510 -2.168 C28 O21 44 
O21 H1  H1  H  0 1 N N N N N N -18.522 -22.332 12.409 -0.536  -1.700 0.223  H1  O21 45 
O21 H2  H2  H  0 1 N N N N N N -18.552 -23.183 10.827 1.230   -1.823 0.039  H2  O21 46 
O21 H3  H3  H  0 1 N N N N N N -18.875 -21.001 9.641  -0.846  -3.044 -1.837 H3  O21 47 
O21 H4  H4  H  0 1 N N N N N N -20.177 -21.249 10.853 0.920   -3.167 -2.022 H4  O21 48 
O21 H5  H5  H  0 1 N N N N N N -20.407 -18.683 10.655 0.444   -5.681 -1.886 H5  O21 49 
O21 H6  H6  H  0 1 N N N N N N -19.076 -18.909 9.469  -1.266  -5.319 -1.547 H6  O21 50 
O21 H7  H7  H  0 1 N N N N N N -17.587 -17.525 10.976 -1.074  -6.412 0.660  H7  O21 51 
O21 H8  H8  H  0 1 N N N N N N -18.991 -16.608 10.332 -0.597  -7.538 -0.634 H8  O21 52 
O21 H10 H10 H  0 1 N N N N N N -18.966 -16.029 14.138 0.771   -8.844 0.863  H10 O21 53 
O21 H11 H11 H  0 1 N N N N N N -17.439 -16.299 13.230 1.992   -8.036 1.874  H11 O21 54 
O21 H12 H12 H  0 1 N N N N N N -18.664 -15.143 12.604 0.260   -7.796 2.208  H12 O21 55 
O21 H13 H13 H  0 1 N N N N N N -17.599 -18.357 13.209 0.665   -5.336 2.006  H13 O21 56 
O21 H14 H14 H  0 1 N N N N N N -19.051 -18.174 14.251 2.374   -5.698 1.667  H14 O21 57 
O21 H15 H15 H  0 1 N N N N N N -20.311 -19.689 12.788 1.706   -3.478 0.754  H15 O21 58 
O21 H16 H16 H  0 1 N N N N N N -18.796 -20.477 13.348 2.183   -4.604 -0.540 H16 O21 59 
O21 H18 H18 H  0 1 N N N N N N -16.604 -21.784 10.043 1.080   -0.678 -2.155 H18 O21 60 
O21 H19 H19 H  0 1 N N N N N N -16.569 -20.948 11.633 -0.686  -0.554 -1.970 H19 O21 61 
O21 H20 H20 H  0 1 N N N N N N -14.401 -24.541 13.007 2.644   -0.382 -1.333 H20 O21 62 
O21 H21 H21 H  0 1 N N N N N N -9.934  -21.689 17.968 8.848   0.454  0.552  H21 O21 63 
O21 H22 H22 H  0 1 N N N N N N -11.563 -21.994 18.660 8.232   0.994  2.132  H22 O21 64 
O21 H23 H23 H  0 1 N N N N N N -10.541 -23.372 18.130 8.933   -0.632 1.959  H23 O21 65 
O21 H24 H24 H  0 1 N N N N N N -12.714 -23.751 18.438 7.560   2.101  0.490  H24 O21 66 
O21 H25 H25 H  0 1 N N N N N N -15.087 -26.154 19.774 8.111   3.641  -0.814 H25 O21 67 
O21 H26 H26 H  0 1 N N N N N N -13.422 -25.923 19.141 7.557   5.318  -0.592 H26 O21 68 
O21 H27 H27 H  0 1 N N N N N N -14.358 -24.513 19.743 7.496   4.173  0.770  H27 O21 69 
O21 H28 H28 H  0 1 N N N N N N -16.958 -23.578 9.305  -2.078  -0.249 -0.680 H28 O21 70 
O21 H29 H29 H  0 1 N N N N N N -14.503 -27.191 11.297 -1.477  4.134  1.295  H29 O21 71 
O21 H30 H30 H  0 1 N N N N N N -17.162 -26.746 7.591  -4.465  0.067  -0.251 H30 O21 72 
O21 H31 H31 H  0 1 N N N N N N -18.611 -23.740 8.154  -4.123  2.453  2.355  H31 O21 73 
O21 H32 H32 H  0 1 N N N N N N -19.196 -22.045 6.466  -5.990  3.605  3.468  H32 O21 74 
O21 H33 H33 H  0 1 N N N N N N -18.210 -22.194 4.196  -8.283  3.361  2.610  H33 O21 75 
O21 H34 H34 H  0 1 N N N N N N -16.688 -24.060 3.684  -8.721  1.964  0.633  H34 O21 76 
O21 H35 H35 H  0 1 N N N N N N -16.015 -26.848 5.927  -6.228  0.517  -1.434 H35 O21 77 
O21 H36 H36 H  0 1 N N N N N N -14.181 -27.781 3.114  -7.542  -1.082 -2.744 H36 O21 78 
O21 H38 H38 H  0 1 N N N N N N -12.941 -28.975 5.153  -9.672  -2.181 -2.998 H38 O21 79 
O21 H39 H39 H  0 1 N N N N N N -13.514 -27.606 6.291  -10.294 -1.331 -1.452 H39 O21 80 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
O21 O4  C26 DOUB N N 1  
O21 C27 C26 SING N N 2  
O21 C27 C28 DOUB N N 3  
O21 C26 N6  SING N N 4  
O21 C24 C23 DOUB Y N 5  
O21 C24 C25 SING Y N 6  
O21 C23 C22 SING Y N 7  
O21 N6  C25 SING N N 8  
O21 C25 C20 DOUB Y N 9  
O21 C22 C21 DOUB Y N 10 
O21 C20 C21 SING Y N 11 
O21 C20 N5  SING N N 12 
O21 N5  C19 SING N N 13 
O21 C19 N7  DOUB Y N 14 
O21 C19 C18 SING Y N 15 
O21 N7  C29 SING Y N 16 
O21 C18 C17 DOUB Y N 17 
O21 C12 C13 SING N N 18 
O21 C12 N3  SING N N 19 
O21 C11 C10 SING N N 20 
O21 C11 N3  SING N N 21 
O21 C29 N8  DOUB Y N 22 
O21 C13 N4  SING N N 23 
O21 C17 N8  SING Y N 24 
O21 C17 N2  SING N N 25 
O21 C9  C10 SING N N 26 
O21 C9  N2  SING N N 27 
O21 N3  C16 SING N N 28 
O21 N2  C8  SING N N 29 
O21 N4  C14 SING N N 30 
O21 N4  C15 SING N N 31 
O21 C16 C15 SING N N 32 
O21 C8  N1  SING N N 33 
O21 C8  O3  DOUB N N 34 
O21 N1  C7  SING N N 35 
O21 CL1 C6  SING N N 36 
O21 C7  C6  DOUB Y N 37 
O21 C7  C30 SING Y N 38 
O21 C6  C4  SING Y N 39 
O21 CL2 C30 SING N N 40 
O21 C30 C2  DOUB Y N 41 
O21 C4  O2  SING N N 42 
O21 C4  C3  DOUB Y N 43 
O21 O2  C5  SING N N 44 
O21 C2  C3  SING Y N 45 
O21 C2  O1  SING N N 46 
O21 O1  C1  SING N N 47 
O21 C10 H1  SING N N 48 
O21 C10 H2  SING N N 49 
O21 C11 H3  SING N N 50 
O21 C11 H4  SING N N 51 
O21 C12 H5  SING N N 52 
O21 C12 H6  SING N N 53 
O21 C13 H7  SING N N 54 
O21 C13 H8  SING N N 55 
O21 C14 H10 SING N N 56 
O21 C14 H11 SING N N 57 
O21 C14 H12 SING N N 58 
O21 C15 H13 SING N N 59 
O21 C15 H14 SING N N 60 
O21 C16 H15 SING N N 61 
O21 C16 H16 SING N N 62 
O21 C9  H18 SING N N 63 
O21 C9  H19 SING N N 64 
O21 N1  H20 SING N N 65 
O21 C5  H21 SING N N 66 
O21 C5  H22 SING N N 67 
O21 C5  H23 SING N N 68 
O21 C3  H24 SING N N 69 
O21 C1  H25 SING N N 70 
O21 C1  H26 SING N N 71 
O21 C1  H27 SING N N 72 
O21 C18 H28 SING N N 73 
O21 C29 H29 SING N N 74 
O21 N5  H30 SING N N 75 
O21 C21 H31 SING N N 76 
O21 C22 H32 SING N N 77 
O21 C23 H33 SING N N 78 
O21 C24 H34 SING N N 79 
O21 N6  H35 SING N N 80 
O21 C27 H36 SING N N 81 
O21 C28 H38 SING N N 82 
O21 C28 H39 SING N N 83 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
O21 SMILES           ACDLabs              12.01 "C(CN1CCN(C)CC1)CN(C(Nc2c(c(OC)cc(c2Cl)OC)Cl)=O)c3ncnc(c3)Nc4ccccc4NC(=O)\C=C"                                                                                                                                                     
O21 InChI            InChI                1.03  "InChI=1S/C30H36Cl2N8O4/c1-5-26(41)36-21-10-7-6-9-20(21)35-24-18-25(34-19-33-24)40(12-8-11-39-15-13-38(2)14-16-39)30(42)37-29-27(31)22(43-3)17-23(44-4)28(29)32/h5-7,9-10,17-19H,1,8,11-16H2,2-4H3,(H,36,41)(H,37,42)(H,33,34,35)" 
O21 InChIKey         InChI                1.03  QBUHMHIIROCODG-UHFFFAOYSA-N                                                                                                                                                                                                        
O21 SMILES_CANONICAL CACTVS               3.385 "COc1cc(OC)c(Cl)c(NC(=O)N(CCCN2CCN(C)CC2)c3cc(Nc4ccccc4NC(=O)C=C)ncn3)c1Cl"                                                                                                                                                        
O21 SMILES           CACTVS               3.385 "COc1cc(OC)c(Cl)c(NC(=O)N(CCCN2CCN(C)CC2)c3cc(Nc4ccccc4NC(=O)C=C)ncn3)c1Cl"                                                                                                                                                        
O21 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN1CCN(CC1)CCCN(c2cc(ncn2)Nc3ccccc3NC(=O)C=C)C(=O)Nc4c(c(cc(c4Cl)OC)OC)Cl"                                                                                                                                                        
O21 SMILES           "OpenEye OEToolkits" 2.0.7 "CN1CCN(CC1)CCCN(c2cc(ncn2)Nc3ccccc3NC(=O)C=C)C(=O)Nc4c(c(cc(c4Cl)OC)OC)Cl"                                                                                                                                                        
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
O21 "SYSTEMATIC NAME" ACDLabs              12.01 "N-{2-[(6-{[(2,6-dichloro-3,5-dimethoxyphenyl)carbamoyl][3-(4-methylpiperazin-1-yl)propyl]amino}pyrimidin-4-yl)amino]phenyl}prop-2-enamide"          
O21 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-[2-[[6-[[2,6-bis(chloranyl)-3,5-dimethoxy-phenyl]carbamoyl-[3-(4-methylpiperazin-1-yl)propyl]amino]pyrimidin-4-yl]amino]phenyl]prop-2-enamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
O21 "Create component" 2019-06-04 RCSB 
O21 "Initial release"  2019-06-19 RCSB 
O21 "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            O21 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C28 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
