data_M41
# 
_chem_comp.id                                    M41 
_chem_comp.name                                  "N-(benzylsulfonyl)-D-valyl-N-[2-(aminomethyl)-5-chlorobenzyl]-L-prolinamide" 
_chem_comp.type                                  peptide-like 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C25 H33 Cl N4 O4 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2011-04-25 
_chem_comp.pdbx_modified_date                    2012-04-20 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        521.072 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     M41 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3RMN 
_chem_comp.pdbx_subcomponent_list                "PMS DVA PRO 00T" 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
M41 C7   C7   C  0 1 N N N 15.943 -18.374 22.061 -5.563  0.618  0.334  C    PMS 1  
M41 S8   S8   S  0 1 N N N 15.480 -16.775 21.896 -4.218  0.704  -0.880 S    PMS 2  
M41 C4   C4   C  0 1 Y N N 15.207 -19.041 23.207 -6.848  0.253  -0.364 C1   PMS 3  
M41 C5   C5   C  0 1 Y N N 13.902 -19.503 23.048 -7.203  -1.075 -0.507 C2   PMS 4  
M41 C6   C6   C  0 1 Y N N 13.242 -20.110 24.115 -8.382  -1.410 -1.147 C3   PMS 5  
M41 C1   C1   C  0 1 Y N N 13.889 -20.257 25.338 -9.205  -0.417 -1.644 C4   PMS 6  
M41 C2   C2   C  0 1 Y N N 15.192 -19.799 25.499 -8.849  0.912  -1.501 C5   PMS 7  
M41 C33  C33  C  0 1 Y N N 15.849 -19.195 24.434 -7.670  1.246  -0.861 C6   PMS 8  
M41 O12  O12  O  0 1 N N N 15.960 -16.299 20.635 -3.922  -0.589 -1.389 O2S  PMS 9  
M41 O13  O13  O  0 1 N N N 14.053 -16.706 22.012 -4.405  1.809  -1.754 O1S  PMS 10 
M41 N9   N9   N  0 1 N N N 16.140 -15.933 23.103 -2.882  1.109  0.010  N    DVA 11 
M41 C10  C10  C  0 1 N N R 17.271 -15.050 22.938 -2.365  0.181  1.019  CA   DVA 12 
M41 C14  C14  C  0 1 N N N 17.809 -14.723 24.334 -2.939  0.546  2.390  CB   DVA 13 
M41 C15  C15  C  0 1 N N N 17.944 -15.962 25.220 -2.457  -0.467 3.430  CG1  DVA 14 
M41 C16  C16  C  0 1 N N N 19.125 -13.958 24.257 -2.465  1.947  2.784  CG2  DVA 15 
M41 C11  C11  C  0 1 N N N 16.903 -13.743 22.286 -0.862  0.272  1.063  C    DVA 16 
M41 O22  O22  O  0 1 N N N 15.962 -13.098 22.723 -0.311  1.324  0.816  O    DVA 17 
M41 N17  N17  N  0 1 N N N 17.640 -13.330 21.257 -0.129  -0.814 1.377  N    PRO 18 
M41 C18  C18  C  0 1 N N S 17.336 -12.054 20.599 1.329   -0.841 1.561  CA   PRO 19 
M41 C23  C23  C  0 1 N N N 15.874 -11.894 20.300 2.014   -0.392 0.296  C    PRO 20 
M41 O32  O32  O  0 1 N N N 15.248 -12.806 19.781 1.354   -0.078 -0.672 O    PRO 21 
M41 C19  C19  C  0 1 N N N 18.153 -12.087 19.308 1.724   -2.297 1.883  CB   PRO 22 
M41 C20  C20  C  0 1 N N N 19.253 -13.112 19.536 0.538   -3.115 1.305  CG   PRO 23 
M41 C21  C21  C  0 1 N N N 18.786 -14.019 20.669 -0.658  -2.172 1.599  CD   PRO 24 
M41 N24  N24  N  0 1 N N N 15.280 -10.741 20.625 3.359   -0.339 0.240  N19  00T 25 
M41 C25  C25  C  0 1 N N N 13.865 -10.493 20.360 4.025   0.097  -0.990 C10  00T 26 
M41 C26  C26  C  0 1 Y N N 12.996 -10.494 21.610 5.518   0.067  -0.791 C6   00T 27 
M41 C27  C27  C  0 1 Y N N 12.207 -11.594 21.924 6.204   -1.130 -0.885 C5   00T 28 
M41 C34  C34  C  0 1 N N N 12.228 -12.823 21.042 5.457   -2.403 -1.188 C32  00T 29 
M41 N35  N35  N  0 1 N N N 13.021 -13.879 21.651 5.190   -2.484 -2.630 N33  00T 30 
M41 C28  C28  C  0 1 Y N N 11.403 -11.585 23.058 7.574   -1.158 -0.702 C4   00T 31 
M41 C29  C29  C  0 1 Y N N 11.364 -10.460 23.875 8.259   0.009  -0.425 C3   00T 32 
M41 C30  C30  C  0 1 Y N N 12.149 -9.356  23.552 7.574   1.207  -0.330 C2   00T 33 
M41 CL3  CL3  CL 0 0 N N N 12.125 -7.902  24.606 8.433   2.675  0.019  CL1  00T 34 
M41 C31  C31  C  0 1 Y N N 12.963 -9.374  22.430 6.203   1.237  -0.519 C7   00T 35 
M41 H7   H7   H  0 1 N N N 17.024 -18.414 22.260 -5.676  1.587  0.820  H2A  PMS 36 
M41 H7A  H7A  H  0 1 N N N 15.712 -18.910 21.129 -5.328  -0.138 1.083  H1   PMS 37 
M41 H5   H5   H  0 1 N N N 13.402 -19.391 22.097 -6.560  -1.851 -0.120 H2   PMS 38 
M41 H6   H6   H  0 1 N N N 12.230 -20.466 23.993 -8.660  -2.447 -1.258 H3   PMS 39 
M41 H1   H1   H  0 1 N N N 13.378 -20.728 26.164 -10.128 -0.678 -2.140 H4   PMS 40 
M41 H2   H2   H  0 1 N N N 15.692 -19.912 26.449 -9.492  1.688  -1.889 H5   PMS 41 
M41 H33  H33  H  0 1 N N N 16.863 -18.843 24.558 -7.392  2.284  -0.750 H6   PMS 42 
M41 HN9  HN9  H  0 1 N N N 15.403 -15.349 23.444 -2.441  1.961  -0.136 H    DVA 43 
M41 H10  H10  H  0 1 N N N 18.004 -15.559 22.295 -2.660  -0.837 0.761  HA   DVA 44 
M41 H14  H14  H  0 1 N N N 17.061 -14.073 24.811 -4.028  0.530  2.344  HB   DVA 45 
M41 H15  H15  H  0 1 N N N 18.333 -15.668 26.206 -1.367  -0.482 3.445  HG11 DVA 46 
M41 H15A H15A H  0 0 N N N 16.958 -16.435 25.341 -2.830  -0.182 4.414  HG12 DVA 47 
M41 H15B H15B H  0 0 N N N 18.638 -16.675 24.750 -2.831  -1.458 3.173  HG13 DVA 48 
M41 H16  H16  H  0 1 N N N 19.483 -13.740 25.274 -2.809  2.668  2.042  HG21 DVA 49 
M41 H16A H16A H  0 0 N N N 19.873 -14.567 23.728 -2.874  2.207  3.760  HG22 DVA 50 
M41 H16B H16B H  0 0 N N N 18.969 -13.015 23.713 -1.376  1.963  2.829  HG23 DVA 51 
M41 H18  H18  H  0 1 N N N 17.589 -11.201 21.246 1.610   -0.189 2.388  HA   PRO 52 
M41 H19  H19  H  0 1 N N N 17.521 -12.379 18.456 2.656   -2.564 1.384  HB2  PRO 53 
M41 H19A H19A H  0 0 N N N 18.583 -11.097 19.095 1.806   -2.446 2.960  HB3  PRO 54 
M41 H20  H20  H  0 1 N N N 19.424 -13.699 18.622 0.660   -3.275 0.234  HG2  PRO 55 
M41 H20A H20A H  0 0 N N N 20.192 -12.610 19.811 0.425   -4.063 1.830  HG3  PRO 56 
M41 H21  H21  H  0 1 N N N 19.583 -14.163 21.413 -0.990  -2.287 2.631  HD2  PRO 57 
M41 H21A H21A H  0 0 N N N 18.497 -15.009 20.287 -1.479  -2.377 0.911  HD3  PRO 58 
M41 HN24 HN24 H  0 0 N N N 15.822 -10.025 21.064 3.887   -0.590 1.014  HN19 00T 59 
M41 H25  H25  H  0 1 N N N 13.775 -9.506  19.884 3.753   -0.571 -1.807 H10  00T 60 
M41 H25A H25A H  0 0 N N N 13.500 -11.286 19.690 3.711   1.113  -1.232 H10A 00T 61 
M41 H34  H34  H  0 1 N N N 11.198 -13.182 20.902 6.059   -3.259 -0.881 H32  00T 62 
M41 H34A H34A H  0 0 N N N 12.668 -12.559 20.069 4.513   -2.409 -0.643 H32A 00T 63 
M41 HN35 HN35 H  0 0 N N N 13.023 -14.681 21.054 6.046   -2.415 -3.160 HN33 00T 64 
M41 HN3A HN3A H  0 0 N N N 13.959 -13.558 21.781 4.690   -3.330 -2.858 HN3A 00T 65 
M41 H28  H28  H  0 1 N N N 10.808 -12.452 23.305 8.109   -2.094 -0.776 H4   00T 66 
M41 H29  H29  H  0 1 N N N 10.732 -10.443 24.750 9.329   -0.014 -0.281 H3   00T 67 
M41 H31  H31  H  0 1 N N N 13.573 -8.515  22.193 5.668   2.172  -0.450 H7   00T 68 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
M41 C1  C2   DOUB Y N 1  
M41 C1  C6   SING Y N 2  
M41 C2  C33  SING Y N 3  
M41 CL3 C30  SING N N 4  
M41 C4  C5   SING Y N 5  
M41 C4  C7   SING N N 6  
M41 C4  C33  DOUB Y N 7  
M41 C5  C6   DOUB Y N 8  
M41 C7  S8   SING N N 9  
M41 S8  N9   SING N N 10 
M41 S8  O12  DOUB N N 11 
M41 S8  O13  DOUB N N 12 
M41 N9  C10  SING N N 13 
M41 C10 C11  SING N N 14 
M41 C10 C14  SING N N 15 
M41 C11 N17  SING N N 16 
M41 C11 O22  DOUB N N 17 
M41 C14 C15  SING N N 18 
M41 C14 C16  SING N N 19 
M41 N17 C18  SING N N 20 
M41 N17 C21  SING N N 21 
M41 C18 C19  SING N N 22 
M41 C18 C23  SING N N 23 
M41 C19 C20  SING N N 24 
M41 C20 C21  SING N N 25 
M41 C23 N24  SING N N 26 
M41 C23 O32  DOUB N N 27 
M41 N24 C25  SING N N 28 
M41 C25 C26  SING N N 29 
M41 C26 C27  DOUB Y N 30 
M41 C26 C31  SING Y N 31 
M41 C27 C28  SING Y N 32 
M41 C27 C34  SING N N 33 
M41 C28 C29  DOUB Y N 34 
M41 C29 C30  SING Y N 35 
M41 C30 C31  DOUB Y N 36 
M41 C34 N35  SING N N 37 
M41 C1  H1   SING N N 38 
M41 C2  H2   SING N N 39 
M41 C5  H5   SING N N 40 
M41 C6  H6   SING N N 41 
M41 C7  H7   SING N N 42 
M41 C7  H7A  SING N N 43 
M41 N9  HN9  SING N N 44 
M41 C10 H10  SING N N 45 
M41 C14 H14  SING N N 46 
M41 C15 H15  SING N N 47 
M41 C15 H15A SING N N 48 
M41 C15 H15B SING N N 49 
M41 C16 H16  SING N N 50 
M41 C16 H16A SING N N 51 
M41 C16 H16B SING N N 52 
M41 C18 H18  SING N N 53 
M41 C19 H19  SING N N 54 
M41 C19 H19A SING N N 55 
M41 C20 H20  SING N N 56 
M41 C20 H20A SING N N 57 
M41 C21 H21  SING N N 58 
M41 C21 H21A SING N N 59 
M41 N24 HN24 SING N N 60 
M41 C25 H25  SING N N 61 
M41 C25 H25A SING N N 62 
M41 C28 H28  SING N N 63 
M41 C29 H29  SING N N 64 
M41 C31 H31  SING N N 65 
M41 C33 H33  SING N N 66 
M41 C34 H34  SING N N 67 
M41 C34 H34A SING N N 68 
M41 N35 HN35 SING N N 69 
M41 N35 HN3A SING N N 70 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
M41 SMILES           ACDLabs              12.01 "O=C(NCc1cc(Cl)ccc1CN)C3N(C(=O)C(NS(=O)(=O)Cc2ccccc2)C(C)C)CCC3" 
M41 SMILES_CANONICAL CACTVS               3.370 "CC(C)[C@@H](N[S](=O)(=O)Cc1ccccc1)C(=O)N2CCC[C@H]2C(=O)NCc3cc(Cl)ccc3CN" 
M41 SMILES           CACTVS               3.370 "CC(C)[CH](N[S](=O)(=O)Cc1ccccc1)C(=O)N2CCC[CH]2C(=O)NCc3cc(Cl)ccc3CN" 
M41 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 "CC(C)[C@H](C(=O)N1CCC[C@H]1C(=O)NCc2cc(ccc2CN)Cl)NS(=O)(=O)Cc3ccccc3" 
M41 SMILES           "OpenEye OEToolkits" 1.7.2 "CC(C)C(C(=O)N1CCCC1C(=O)NCc2cc(ccc2CN)Cl)NS(=O)(=O)Cc3ccccc3" 
M41 InChI            InChI                1.03  
"InChI=1S/C25H33ClN4O4S/c1-17(2)23(29-35(33,34)16-18-7-4-3-5-8-18)25(32)30-12-6-9-22(30)24(31)28-15-20-13-21(26)11-10-19(20)14-27/h3-5,7-8,10-11,13,17,22-23,29H,6,9,12,14-16,27H2,1-2H3,(H,28,31)/t22-,23+/m0/s1" 
M41 InChIKey         InChI                1.03  PWCVAVZHMMVMMM-XZOQPEGZSA-N 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
M41 "SYSTEMATIC NAME" ACDLabs              12.01 "N-(benzylsulfonyl)-D-valyl-N-[2-(aminomethyl)-5-chlorobenzyl]-L-prolinamide"                                                            
M41 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 "(2S)-N-[[2-(aminomethyl)-5-chloranyl-phenyl]methyl]-1-[(2R)-3-methyl-2-[(phenylmethyl)sulfonylamino]butanoyl]pyrrolidine-2-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
M41 "Create component"     2011-04-25 PDBJ 
M41 "Modify aromatic_flag" 2011-06-04 RCSB 
M41 "Modify descriptor"    2011-06-04 RCSB 
# 
