data_PW0
# 
_chem_comp.id                                    PW0 
_chem_comp.name                                  "(~{Z})-2-[[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylamino]pent-2-enedioic acid" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C13 H17 N2 O9 P" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-10-05 
_chem_comp.pdbx_modified_date                    2022-11-11 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        376.256 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     PW0 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8AYK 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
PW0 N1   N1   N 0 1 Y N N -3.177 -3.423  4.451  -2.237 -3.408 -0.072 N1   PW0 1  
PW0 C2   C2   C 0 1 Y N N -2.593 -3.883  5.557  -0.991 -3.838 -0.045 C2   PW0 2  
PW0 C2A  C2A  C 0 1 N N N -1.598 -3.007  6.285  -0.709 -5.313 -0.171 C2A  PW0 3  
PW0 C3   C3   C 0 1 Y N N -2.935 -5.156  6.046  0.063  -2.947 0.097  C3   PW0 4  
PW0 O3   O3   O 0 1 N N N -2.418 -5.609  7.208  1.346  -3.395 0.123  O3   PW0 5  
PW0 C4   C4   C 0 1 Y N N -3.863 -5.971  5.369  -0.212 -1.588 0.212  C4   PW0 6  
PW0 C4A  C4A  C 0 1 N N N -4.252 -7.325  5.904  0.902  -0.586 0.367  C4A  PW0 7  
PW0 C5   C5   C 0 1 Y N N -4.425 -5.478  4.186  -1.536 -1.179 0.179  C5   PW0 8  
PW0 C6   C6   C 0 1 Y N N -4.036 -4.214  3.763  -2.532 -2.127 0.034  C6   PW0 9  
PW0 C5A  C5A  C 0 1 N N N -5.404 -6.290  3.409  -1.885 0.282  0.300  C5A  PW0 10 
PW0 O4P  O4P  O 0 1 N N N -4.668 -7.321  2.693  -3.304 0.438  0.239  O4P  PW0 11 
PW0 P    P    P 0 1 N N N -5.462 -8.657  2.193  -4.033 1.871  0.337  P    PW0 12 
PW0 O1P  O1P  O 0 1 N N N -5.993 -9.294  3.442  -3.483 2.776  -0.697 O1P  PW0 13 
PW0 O2P  O2P  O 0 1 N N N -4.431 -9.440  1.442  -5.615 1.685  0.100  O2P  PW0 14 
PW0 O3P  O3P  O 0 1 N N N -6.620 -8.142  1.319  -3.779 2.503  1.795  O3P  PW0 15 
PW0 N    N    N 0 1 N N N -4.912 -7.205  7.209  1.337  -0.130 -0.956 N    PW0 16 
PW0 CA   CA   C 0 1 N N N -5.063 -8.285  8.003  2.217  0.795  -1.057 CA   PW0 17 
PW0 CB   CB   C 0 1 N N N -6.056 -9.415  7.832  2.897  1.326  0.179  CB   PW0 18 
PW0 CG   CG   C 0 1 N N N -7.020 -9.313  6.673  4.129  0.473  0.488  CG   PW0 19 
PW0 CD   CD   C 0 1 N N N -8.323 -8.574  6.964  4.810  1.004  1.724  CD   PW0 20 
PW0 OE1  OE1  O 0 1 N N N -8.258 -7.431  7.392  5.920  0.408  2.187  OE1  PW0 21 
PW0 OE2  OE2  O 0 1 N N N -9.366 -9.119  6.705  4.356  1.966  2.297  OE2  PW0 22 
PW0 C    C    C 0 1 N N N -4.181 -8.506  9.047  2.566  1.344  -2.389 C    PW0 23 
PW0 O    O    O 0 1 N N N -3.598 -9.561  8.909  3.400  2.220  -2.485 O    PW0 24 
PW0 OXT  OXT  O 0 1 N N N -3.968 -7.781  10.016 1.957  0.869  -3.493 OXT  PW0 25 
PW0 H2A1 H2A1 H 0 0 N N N -1.496 -2.049  5.755  -0.585 -5.571 -1.223 H2A1 PW0 26 
PW0 H2A2 H2A2 H 0 0 N N N -1.953 -2.823  7.310  0.204  -5.556 0.372  H2A2 PW0 27 
PW0 HO3  HO3  H 0 1 N N N -1.811 -4.967  7.557  1.764  -3.441 -0.748 HO3  PW0 28 
PW0 H4A1 H4A1 H 0 1 N N N -4.941 -7.807  5.195  0.546  0.266  0.946  H4A1 PW0 29 
PW0 H4A2 H4A2 H 0 1 N N N -3.348 -7.942  6.014  1.741  -1.052 0.885  H4A2 PW0 30 
PW0 H6   H6   H 0 1 N N N -4.440 -3.840  2.834  -3.565 -1.814 0.008  H6   PW0 31 
PW0 H5A1 H5A1 H 0 1 N N N -5.937 -5.647  2.693  -1.518 0.665  1.252  H5A1 PW0 32 
PW0 H5A2 H5A2 H 0 1 N N N -6.128 -6.756  4.093  -1.423 0.835  -0.517 H5A2 PW0 33 
PW0 HOP2 HOP2 H 0 1 N N N -4.264 -10.259 1.894  -6.119 2.509  0.145  HOP2 PW0 34 
PW0 HB2  HB2  H 0 1 N N N -6.652 -9.475  8.755  3.203  2.358  0.010  HB2  PW0 35 
PW0 HG1  HG1  H 0 1 N N N -7.274 -10.334 6.353  3.823  -0.559 0.658  HG1  PW0 36 
PW0 HG2  HG2  H 0 1 N N N -6.509 -8.788  5.853  4.820  0.514  -0.353 HG2  PW0 37 
PW0 HOE1 HOE1 H 0 1 N N N -9.134 -7.074  7.477  6.321  0.785  2.982  HOE1 PW0 38 
PW0 HOXT HOXT H 0 1 N N N -3.315 -8.184  10.576 2.218  1.258  -4.339 HOXT PW0 39 
PW0 H2A3 H2A3 H 0 0 N N N -0.622 -3.512  6.320  -1.541 -5.879 0.246  H2A3 PW0 40 
PW0 HOP3 HOP3 H 0 1 N N N -7.448 -8.330  1.746  -4.115 1.962  2.523  HOP3 PW0 41 
PW0 HB1  HB1  H 0 1 N N N -5.482 -10.345 7.705  2.206  1.285  1.020  HB1  PW0 42 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
PW0 O3P P    SING N N 1  
PW0 O2P P    SING N N 2  
PW0 P   O4P  SING N N 3  
PW0 P   O1P  DOUB N N 4  
PW0 O4P C5A  SING N N 5  
PW0 C5A C5   SING N N 6  
PW0 C6  C5   DOUB Y N 7  
PW0 C6  N1   SING Y N 8  
PW0 C5  C4   SING Y N 9  
PW0 N1  C2   DOUB Y N 10 
PW0 C4  C4A  SING N N 11 
PW0 C4  C3   DOUB Y N 12 
PW0 C2  C3   SING Y N 13 
PW0 C2  C2A  SING N N 14 
PW0 C4A N    SING N N 15 
PW0 C3  O3   SING N N 16 
PW0 CG  CD   SING N N 17 
PW0 CG  CB   SING N N 18 
PW0 OE2 CD   DOUB N N 19 
PW0 CD  OE1  SING N N 20 
PW0 N   CA   DOUB N N 21 
PW0 CB  CA   SING N N 22 
PW0 CA  C    SING N N 23 
PW0 O   C    DOUB N N 24 
PW0 C   OXT  SING N N 25 
PW0 C2A H2A1 SING N N 26 
PW0 C2A H2A2 SING N N 27 
PW0 O3  HO3  SING N N 28 
PW0 C4A H4A1 SING N N 29 
PW0 C4A H4A2 SING N N 30 
PW0 C6  H6   SING N N 31 
PW0 C5A H5A1 SING N N 32 
PW0 C5A H5A2 SING N N 33 
PW0 O2P HOP2 SING N N 34 
PW0 CB  HB2  SING N N 35 
PW0 CG  HG1  SING N N 36 
PW0 CG  HG2  SING N N 37 
PW0 OE1 HOE1 SING N N 38 
PW0 OXT HOXT SING N N 39 
PW0 C2A H2A3 SING N N 40 
PW0 O3P HOP3 SING N N 41 
PW0 CB  HB1  SING N N 42 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
PW0 InChI            InChI                1.06    "InChI=1S/C13H17N2O9P/c1-7-12(18)9(8(4-14-7)6-24-25(21,22)23)5-15-10(13(19)20)2-3-11(16)17/h4,18H,2-3,5-6H2,1H3,(H,16,17)(H,19,20)(H2,21,22,23)" 
PW0 InChIKey         InChI                1.06    AQYBBWUPMNWMHD-UHFFFAOYSA-N                                                                                                                      
PW0 SMILES_CANONICAL CACTVS               3.385   "Cc1ncc(CO[P](O)(O)=O)c(CN=C(CCC(O)=O)C(O)=O)c1O"                                                                                                
PW0 SMILES           CACTVS               3.385   "Cc1ncc(CO[P](O)(O)=O)c(CN=C(CCC(O)=O)C(O)=O)c1O"                                                                                                
PW0 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "Cc1c(c(c(cn1)COP(=O)(O)O)CN=C(CCC(=O)O)C(=O)O)O"                                                                                                
PW0 SMILES           "OpenEye OEToolkits" 3.1.0.0 "Cc1c(c(c(cn1)COP(=O)(O)O)CN=C(CCC(=O)O)C(=O)O)O"                                                                                                
# 
_pdbx_chem_comp_identifier.comp_id           PW0 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   3.1.0.0 
_pdbx_chem_comp_identifier.identifier        "2-[[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylimino]pentanedioic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
PW0 "Create component"   2022-10-05 PDBE 
PW0 "Other modification" 2022-10-20 PDBE 
PW0 "Initial release"    2022-11-16 RCSB 
# 
