data_EE0
# 
_chem_comp.id                                    EE0 
_chem_comp.name                                  "(2~{R})-2-azanylpentanoic acid" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C5 H11 N O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2019-12-13 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        117.146 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     EE0 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6L5Z 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
EE0 C28 C28 C 0 1 N N N N N N 56.105 27.858 -3.668 3.372  0.608  0.405  C28 EE0 1  
EE0 C29 C29 C 0 1 N N N N N N 56.330 26.408 -3.320 2.227  -0.072 -0.349 C29 EE0 2  
EE0 C30 C30 C 0 1 N N N N N N 56.406 25.483 -4.516 0.890  0.362  0.254  C30 EE0 3  
EE0 CA  C31 C 0 1 N N R Y N N 57.717 25.585 -5.271 -0.255 -0.317 -0.501 C31 EE0 4  
EE0 C   C32 C 0 1 N N N Y N Y 57.887 24.592 -6.399 -1.573 0.203  0.011  C32 EE0 5  
EE0 N   N51 N 0 1 N N N Y Y N 58.890 25.699 -4.439 -0.186 -1.770 -0.289 N51 EE0 6  
EE0 O   O33 O 0 1 N N N Y N Y 58.725 24.712 -7.175 -2.211 -0.446 0.807  O33 EE0 7  
EE0 OXT O1  O 0 1 N Y N Y N Y 57.014 23.523 -6.692 -2.039 1.387  -0.416 O1  EE0 8  
EE0 H1  H1  H 0 1 N N N N N N 56.063 28.455 -2.745 3.336  0.319  1.456  H1  EE0 9  
EE0 H8  H2  H 0 1 N N N N N N 56.932 28.216 -4.299 4.324  0.299  -0.024 H2  EE0 10 
EE0 H3  H3  H 0 1 N Y N N N N 55.156 27.961 -4.214 3.270  1.690  0.322  H3  EE0 11 
EE0 H4  H4  H 0 1 N N N N N N 55.500 26.075 -2.680 2.263  0.217  -1.400 H4  EE0 12 
EE0 H5  H5  H 0 1 N N N N N N 57.276 26.330 -2.764 2.329  -1.154 -0.266 H5  EE0 13 
EE0 H6  H6  H 0 1 N N N N N N 55.586 25.735 -5.205 0.854  0.074  1.305  H6  EE0 14 
EE0 H7  H7  H 0 1 N N N N N N 56.285 24.448 -4.165 0.788  1.444  0.171  H7  EE0 15 
EE0 HA  H8  H 0 1 N N N Y N N 57.649 26.556 -5.784 -0.167 -0.101 -1.565 H8  EE0 16 
EE0 H   H9  H 0 1 N N N Y Y N 58.721 26.366 -3.713 0.661  -2.153 -0.682 H9  EE0 17 
EE0 H2  H10 H 0 1 N Y N Y Y N 59.098 24.809 -4.032 -0.265 -1.997 0.691  H10 EE0 18 
EE0 HXT H12 H 0 1 N Y N Y N Y 57.293 23.097 -7.494 -2.889 1.679  -0.060 H12 EE0 19 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
EE0 O   C   DOUB N N 1  
EE0 C   CA  SING N N 2  
EE0 CA  C30 SING N N 3  
EE0 CA  N   SING N N 4  
EE0 C30 C29 SING N N 5  
EE0 C28 C29 SING N N 6  
EE0 C   OXT SING N N 7  
EE0 C28 H1  SING N N 8  
EE0 C28 H8  SING N N 9  
EE0 C28 H3  SING N N 10 
EE0 C29 H4  SING N N 11 
EE0 C29 H5  SING N N 12 
EE0 C30 H6  SING N N 13 
EE0 C30 H7  SING N N 14 
EE0 CA  HA  SING N N 15 
EE0 N   H   SING N N 16 
EE0 N   H2  SING N N 17 
EE0 OXT HXT SING N N 18 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
EE0 InChI            InChI                1.03  "InChI=1S/C5H11NO2/c1-2-3-4(6)5(7)8/h4H,2-3,6H2,1H3,(H,7,8)/t4-/m1/s1" 
EE0 InChIKey         InChI                1.03  SNDPXSYFESPGGJ-SCSAIBSYSA-N                                            
EE0 SMILES_CANONICAL CACTVS               3.385 "CCC[C@@H](N)C(O)=O"                                                   
EE0 SMILES           CACTVS               3.385 "CCC[CH](N)C(O)=O"                                                     
EE0 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCC[C@H](C(=O)O)N"                                                    
EE0 SMILES           "OpenEye OEToolkits" 2.0.7 "CCCC(C(=O)O)N"                                                        
# 
_pdbx_chem_comp_identifier.comp_id           EE0 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(2~{R})-2-azanylpentanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
EE0 "Create component" 2019-12-13 PDBJ 
EE0 "Initial release"  2020-10-28 RCSB 
EE0 "Modify backbone"  2023-11-03 PDBE 
EE0 "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            EE0 
_pdbx_chem_comp_pcm.modified_residue_id                DVA 
_pdbx_chem_comp_pcm.type                               Norvaline 
_pdbx_chem_comp_pcm.category                           "Named protein modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               ? 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   ? 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
