data_DL0
#

_chem_comp.id                                   DL0
_chem_comp.name                                 "6-chloranyl-3-[2-(5-methyl-1-phenyl-benzimidazol-2-yl)ethyl]chromen-4-one"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C25 H19 Cl N2 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-08-09
_chem_comp.pdbx_modified_date                   2020-03-27
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       414.884
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    DL0
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6KO1
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
DL0  C12  C1   C   0  1  N  N  N  20.971  3.472  -21.147   0.081   1.262  -0.660  C12  DL0   1  
DL0  C13  C2   C   0  1  N  N  N  21.117  4.989  -21.225   0.759   1.007   0.687  C13  DL0   2  
DL0  C14  C3   C   0  1  Y  N  N  22.189  5.389  -22.178   2.241   0.828   0.477  C14  DL0   3  
DL0  C20  C4   C   0  1  Y  N  N  24.812  6.346  -25.729   6.568  -0.307  -0.238  C20  DL0   4  
DL0  O11  O1   O   0  1  N  N  N  20.591  3.672  -18.353  -1.819  -0.824  -0.512  O11  DL0   5  
DL0  C10  C5   C   0  1  N  N  N  19.635  3.249  -19.004  -2.255   0.308  -0.391  C10  DL0   6  
DL0  C9   C6   C   0  1  N  N  N  19.713  3.010  -20.459  -1.401   1.441  -0.451  C9   DL0   7  
DL0  C8   C7   C   0  1  N  N  N  18.693  2.420  -21.064  -1.922   2.674  -0.319  C8   DL0   8  
DL0  O7   O2   O   0  1  N  N  N  17.543  1.985  -20.475  -3.227   2.894  -0.130  O7   DL0   9  
DL0  C4   C8   C   0  1  Y  N  N  17.401  2.188  -19.123  -4.126   1.890  -0.058  C4   DL0  10  
DL0  C5   C9   C   0  1  Y  N  N  18.375  2.826  -18.365  -3.695   0.560  -0.183  C5   DL0  11  
DL0  C6   C10  C   0  1  Y  N  N  18.150  3.023  -17.008  -4.614  -0.485  -0.116  C6   DL0  12  
DL0  C3   C11  C   0  1  Y  N  N  16.237  1.693  -18.546  -5.476   2.153   0.139  C3   DL0  13  
DL0  C2   C12  C   0  1  Y  N  N  16.042  1.860  -17.185  -6.376   1.110   0.209  C2   DL0  14  
DL0  C1   C13  C   0  1  Y  N  N  16.996  2.529  -16.440  -5.950  -0.204   0.079  C1   DL0  15  
DL0  CL   CL1  CL  0  0  N  N  N  16.773  2.694  -14.720  -7.102  -1.499   0.163  CL   DL0  16  
DL0  N15  N1   N   0  1  Y  N  N  21.922  5.944  -23.411   2.857  -0.362   0.231  N15  DL0  17  
DL0  C16  C14  C   0  1  Y  N  N  23.133  6.005  -24.093   4.208  -0.104   0.094  C16  DL0  18  
DL0  C19  C15  C   0  1  Y  N  N  23.478  6.435  -25.358   5.322  -0.892  -0.160  C19  DL0  19  
DL0  C21  C16  C   0  1  Y  N  N  25.783  5.823  -24.869   6.715   1.061  -0.065  C21  DL0  20  
DL0  C29  C17  C   0  1  N  N  N  27.201  5.618  -25.344   8.086   1.682  -0.155  C29  DL0  21  
DL0  C22  C18  C   0  1  Y  N  N  25.402  5.425  -23.595   5.630   1.853   0.187  C22  DL0  22  
DL0  C17  C19  C   0  1  Y  N  N  24.071  5.506  -23.197   4.357   1.283   0.270  C17  DL0  23  
DL0  N18  N2   N   0  1  Y  N  N  23.465  5.137  -22.001   3.118   1.789   0.500  N18  DL0  24  
DL0  C23  C20  C   0  1  Y  N  N  20.686  6.502  -23.894   2.237  -1.615   0.135  C23  DL0  25  
DL0  C24  C21  C   0  1  Y  N  N  20.540  7.882  -23.971   2.242  -2.303  -1.070  C24  DL0  26  
DL0  C25  C22  C   0  1  Y  N  N  19.297  8.426  -24.252   1.629  -3.538  -1.161  C25  DL0  27  
DL0  C26  C23  C   0  1  Y  N  N  18.211  7.605  -24.475   1.011  -4.089  -0.054  C26  DL0  28  
DL0  C27  C24  C   0  1  Y  N  N  18.367  6.231  -24.437   1.005  -3.405   1.149  C27  DL0  29  
DL0  C28  C25  C   0  1  Y  N  N  19.602  5.672  -24.153   1.621  -2.173   1.248  C28  DL0  30  
DL0  H1   H1   H   0  1  N  N  N  20.971  3.072  -22.172   0.495   2.164  -1.110  H1   DL0  31  
DL0  H2   H2   H   0  1  N  N  N  21.834  3.070  -20.596   0.255   0.413  -1.321  H2   DL0  32  
DL0  H3   H3   H   0  1  N  N  N  21.366  5.375  -20.226   0.586   1.855   1.348  H3   DL0  33  
DL0  H4   H4   H   0  1  N  N  N  20.163  5.423  -21.559   0.345   0.105   1.137  H4   DL0  34  
DL0  H5   H5   H   0  1  N  N  N  25.109  6.690  -26.709   7.436  -0.919  -0.436  H5   DL0  35  
DL0  H6   H6   H   0  1  N  N  N  18.781  2.269  -22.130  -1.257   3.524  -0.366  H6   DL0  36  
DL0  H7   H7   H   0  1  N  N  N  18.871  3.557  -16.406  -4.282  -1.508  -0.217  H7   DL0  37  
DL0  H8   H8   H   0  1  N  N  N  15.497  1.187  -19.149  -5.821   3.172   0.236  H8   DL0  38  
DL0  H9   H9   H   0  1  N  N  N  15.153  1.471  -16.710  -7.425   1.319   0.363  H9   DL0  39  
DL0  H10  H10  H   0  1  N  N  N  22.735  6.828  -26.036   5.213  -1.957  -0.296  H10  DL0  40  
DL0  H11  H11  H   0  1  N  N  N  27.797  6.515  -25.120   8.286   1.973  -1.186  H11  DL0  41  
DL0  H12  H12  H   0  1  N  N  N  27.638  4.750  -24.829   8.129   2.562   0.487  H12  DL0  42  
DL0  H13  H13  H   0  1  N  N  N  27.202  5.439  -26.429   8.834   0.959   0.170  H13  DL0  43  
DL0  H14  H14  H   0  1  N  N  N  26.145  5.049  -22.907   5.756   2.917   0.320  H14  DL0  44  
DL0  H15  H15  H   0  1  N  N  N  21.391  8.527  -23.813   2.723  -1.874  -1.936  H15  DL0  45  
DL0  H16  H16  H   0  1  N  N  N  19.178  9.498  -24.297   1.633  -4.074  -2.099  H16  DL0  46  
DL0  H17  H17  H   0  1  N  N  N  17.241  8.034  -24.679   0.529  -5.052  -0.129  H17  DL0  47  
DL0  H18  H18  H   0  1  N  N  N  17.520  5.590  -24.630   0.521  -3.838   2.012  H18  DL0  48  
DL0  H19  H19  H   0  1  N  N  N  19.722  4.599  -24.133   1.615  -1.640   2.187  H19  DL0  49  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
DL0  C20  C19  DOUB  Y  N   1  
DL0  C20  C21  SING  Y  N   2  
DL0  C19  C16  SING  Y  N   3  
DL0  C29  C21  SING  N  N   4  
DL0  C21  C22  DOUB  Y  N   5  
DL0  C26  C27  DOUB  Y  N   6  
DL0  C26  C25  SING  Y  N   7  
DL0  C27  C28  SING  Y  N   8  
DL0  C25  C24  DOUB  Y  N   9  
DL0  C28  C23  DOUB  Y  N  10  
DL0  C16  N15  SING  Y  N  11  
DL0  C16  C17  DOUB  Y  N  12  
DL0  C24  C23  SING  Y  N  13  
DL0  C23  N15  SING  N  N  14  
DL0  C22  C17  SING  Y  N  15  
DL0  N15  C14  SING  Y  N  16  
DL0  C17  N18  SING  Y  N  17  
DL0  C14  N18  DOUB  Y  N  18  
DL0  C14  C13  SING  N  N  19  
DL0  C13  C12  SING  N  N  20  
DL0  C12  C9   SING  N  N  21  
DL0  C8   O7   SING  N  N  22  
DL0  C8   C9   DOUB  N  N  23  
DL0  O7   C4   SING  N  N  24  
DL0  C9   C10  SING  N  N  25  
DL0  C4   C3   DOUB  Y  N  26  
DL0  C4   C5   SING  Y  N  27  
DL0  C10  C5   SING  N  N  28  
DL0  C10  O11  DOUB  N  N  29  
DL0  C3   C2   SING  Y  N  30  
DL0  C5   C6   DOUB  Y  N  31  
DL0  C2   C1   DOUB  Y  N  32  
DL0  C6   C1   SING  Y  N  33  
DL0  C1   CL   SING  N  N  34  
DL0  C12  H1   SING  N  N  35  
DL0  C12  H2   SING  N  N  36  
DL0  C13  H3   SING  N  N  37  
DL0  C13  H4   SING  N  N  38  
DL0  C20  H5   SING  N  N  39  
DL0  C8   H6   SING  N  N  40  
DL0  C6   H7   SING  N  N  41  
DL0  C3   H8   SING  N  N  42  
DL0  C2   H9   SING  N  N  43  
DL0  C19  H10  SING  N  N  44  
DL0  C29  H11  SING  N  N  45  
DL0  C29  H12  SING  N  N  46  
DL0  C29  H13  SING  N  N  47  
DL0  C22  H14  SING  N  N  48  
DL0  C24  H15  SING  N  N  49  
DL0  C25  H16  SING  N  N  50  
DL0  C26  H17  SING  N  N  51  
DL0  C27  H18  SING  N  N  52  
DL0  C28  H19  SING  N  N  53  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
DL0  InChI             InChI                 1.03   "InChI=1S/C25H19ClN2O2/c1-16-7-10-22-21(13-16)27-24(28(22)19-5-3-2-4-6-19)12-8-17-15-30-23-11-9-18(26)14-20(23)25(17)29/h2-7,9-11,13-15H,8,12H2,1H3"  
DL0  InChIKey          InChI                 1.03   UXCWAAKUKNXUNL-UHFFFAOYSA-N  
DL0  SMILES_CANONICAL  CACTVS                3.385  "Cc1ccc2n(c(CCC3=COc4ccc(Cl)cc4C3=O)nc2c1)c5ccccc5"  
DL0  SMILES            CACTVS                3.385  "Cc1ccc2n(c(CCC3=COc4ccc(Cl)cc4C3=O)nc2c1)c5ccccc5"  
DL0  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "Cc1ccc2c(c1)nc(n2c3ccccc3)CCC4=COc5ccc(cc5C4=O)Cl"  
DL0  SMILES            "OpenEye OEToolkits"  2.0.7  "Cc1ccc2c(c1)nc(n2c3ccccc3)CCC4=COc5ccc(cc5C4=O)Cl"  
#
_pdbx_chem_comp_identifier.comp_id          DL0
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "6-chloranyl-3-[2-(5-methyl-1-phenyl-benzimidazol-2-yl)ethyl]chromen-4-one"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
DL0  "Create component"  2019-08-09  PDBJ  
DL0  "Initial release"   2020-04-01  RCSB  
##
