data_BY0
#

_chem_comp.id                                   BY0
_chem_comp.name                                 "[(1S)-2-(1-benzofuran-3-yl)-1-[[(2S)-2-methyl-3-sulfanyl-propanoyl]amino]ethyl]boronic acid"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C14 H18 B N O4 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-03-27
_chem_comp.pdbx_modified_date                   2019-07-12
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       307.173
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    BY0
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6JN6
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
BY0  C17   C1   C  0  1  Y  N  N  -28.776  12.867  66.566  -3.325   0.525   0.315  C17   BY0   1  
BY0  C14   C2   C  0  1  Y  N  N  -27.417  11.951  68.130  -2.894  -1.575   0.985  C14   BY0   2  
BY0  C13   C3   C  0  1  Y  N  N  -28.543  11.848  67.429  -2.325  -0.364   0.918  C13   BY0   3  
BY0  C16   C4   C  0  1  Y  N  N  -27.670  13.734  66.713  -4.448  -0.283   0.071  C16   BY0   4  
BY0  C1    C5   C  0  1  N  N  N  -29.520  10.693  67.596  -0.936   0.009   1.369  C1    BY0   5  
BY0  C2    C6   C  0  1  N  N  S  -30.162  10.835  68.983   0.007   0.017   0.164  C2    BY0   6  
BY0  N3    N1   N  0  1  N  N  N  -31.090  11.987  69.073   1.326   0.502   0.579  N3    BY0   7  
BY0  C4    C7   C  0  1  N  N  N  -30.712  13.344  69.504   2.425   0.138  -0.110  C4    BY0   8  
BY0  O5    O1   O  0  1  N  N  N  -29.606  13.647  69.808   2.316  -0.527  -1.118  O5    BY0   9  
BY0  C6    C8   C  0  1  N  N  S  -31.769  14.448  69.578   3.790   0.555   0.374  C6    BY0  10  
BY0  C7    C9   C  0  1  N  N  N  -31.673  15.250  70.895   4.857   0.015  -0.581  C7    BY0  11  
BY0  S8    S1   S  0  1  N  N  N  -32.198  14.204  72.292   6.504   0.391   0.078  S8    BY0  12  
BY0  C9    C10  C  0  1  N  N  N  -31.533  15.400  68.406   3.870   2.083   0.416  C9    BY0  13  
BY0  B10   B1   B  0  1  N  N  N  -30.889   9.454  69.268   0.141  -1.440  -0.405  B10   BY0  14  
BY0  O11   O2   O  0  1  N  N  N  -30.226   8.304  69.022   0.711  -2.466   0.395  O11   BY0  15  
BY0  O12   O3   O  0  1  N  N  N  -32.233   9.384  69.348  -0.308  -1.733  -1.720  O12   BY0  16  
BY0  O15   O4   O  0  1  Y  N  N  -26.814  13.133  67.716  -4.142  -1.529   0.488  O15   BY0  17  
BY0  C18   C11  C  0  1  Y  N  N  -29.774  13.166  65.671  -3.352   1.880  -0.013  C18   BY0  18  
BY0  C19   C12  C  0  1  Y  N  N  -29.688  14.332  64.921  -4.486   2.420  -0.579  C19   BY0  19  
BY0  C20   C13  C  0  1  Y  N  N  -28.600  15.194  65.061  -5.595   1.622  -0.821  C20   BY0  20  
BY0  C21   C14  C  0  1  Y  N  N  -27.588  14.887  65.963  -5.579   0.280  -0.505  C21   BY0  21  
BY0  H141  H1   H  0  0  N  N  N  -27.047  11.257  68.870  -2.419  -2.461   1.381  H141  BY0  22  
BY0  H011  H2   H  0  0  N  N  N  -30.294  10.739  66.816  -0.955   1.000   1.822  H011  BY0  23  
BY0  H012  H3   H  0  0  N  N  N  -28.985   9.734  67.525  -0.584  -0.718   2.101  H012  BY0  24  
BY0  H021  H4   H  0  0  N  N  N  -29.362  10.956  69.728  -0.395   0.673  -0.608  H021  BY0  25  
BY0  H031  H5   H  0  0  N  N  N  -32.045  11.831  68.822   1.407   1.086   1.349  H031  BY0  26  
BY0  H061  H6   H  0  0  N  N  N  -32.772  14.003  69.495   3.960   0.155   1.373  H061  BY0  27  
BY0  H072  H7   H  0  0  N  N  N  -30.633  15.573  71.051   4.742  -1.064  -0.680  H072  BY0  28  
BY0  H071  H8   H  0  0  N  N  N  -32.326  16.133  70.834   4.741   0.484  -1.558  H071  BY0  29  
BY0  H081  H9   H  0  0  N  N  N  -32.061  15.012  73.301   7.327  -0.133  -0.847  H081  BY0  30  
BY0  H091  H10  H  0  0  N  N  N  -32.280  16.207  68.432   3.110   2.468   1.097  H091  BY0  31  
BY0  H092  H11  H  0  0  N  N  N  -30.524  15.832  68.482   4.857   2.385   0.766  H092  BY0  32  
BY0  H093  H12  H  0  0  N  N  N  -31.625  14.846  67.460   3.700   2.484  -0.583  H093  BY0  33  
BY0  H111  H13  H  0  0  N  N  N  -30.782   7.565  69.238   0.751  -3.328  -0.041  H111  BY0  34  
BY0  H121  H14  H  0  0  N  N  N  -32.494   8.487  69.522  -0.184  -2.655  -1.982  H121  BY0  35  
BY0  H181  H15  H  0  0  N  N  N  -30.617  12.501  65.552  -2.489   2.502   0.175  H181  BY0  36  
BY0  H191  H16  H  0  0  N  N  N  -30.473  14.574  64.220  -4.513   3.469  -0.832  H191  BY0  37  
BY0  H201  H17  H  0  0  N  N  N  -28.544  16.097  64.471  -6.479   2.056  -1.264  H201  BY0  38  
BY0  H211  H18  H  0  0  N  N  N  -26.742  15.549  66.075  -6.449  -0.331  -0.698  H211  BY0  39  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
BY0  C19  C20   DOUB  Y  N   1  
BY0  C19  C18   SING  Y  N   2  
BY0  C20  C21   SING  Y  N   3  
BY0  C18  C17   DOUB  Y  N   4  
BY0  C21  C16   DOUB  Y  N   5  
BY0  C17  C16   SING  Y  N   6  
BY0  C17  C13   SING  Y  N   7  
BY0  C16  O15   SING  Y  N   8  
BY0  C13  C1    SING  N  N   9  
BY0  C13  C14   DOUB  Y  N  10  
BY0  C1   C2    SING  N  N  11  
BY0  O15  C14   SING  Y  N  12  
BY0  C9   C6    SING  N  N  13  
BY0  C2   N3    SING  N  N  14  
BY0  C2   B10   SING  N  N  15  
BY0  O11  B10   SING  N  N  16  
BY0  N3   C4    SING  N  N  17  
BY0  B10  O12   SING  N  N  18  
BY0  C4   C6    SING  N  N  19  
BY0  C4   O5    DOUB  N  N  20  
BY0  C6   C7    SING  N  N  21  
BY0  C7   S8    SING  N  N  22  
BY0  C14  H141  SING  N  N  23  
BY0  C1   H011  SING  N  N  24  
BY0  C1   H012  SING  N  N  25  
BY0  C2   H021  SING  N  N  26  
BY0  N3   H031  SING  N  N  27  
BY0  C6   H061  SING  N  N  28  
BY0  C7   H072  SING  N  N  29  
BY0  C7   H071  SING  N  N  30  
BY0  S8   H081  SING  N  N  31  
BY0  C9   H091  SING  N  N  32  
BY0  C9   H092  SING  N  N  33  
BY0  C9   H093  SING  N  N  34  
BY0  O11  H111  SING  N  N  35  
BY0  O12  H121  SING  N  N  36  
BY0  C18  H181  SING  N  N  37  
BY0  C19  H191  SING  N  N  38  
BY0  C20  H201  SING  N  N  39  
BY0  C21  H211  SING  N  N  40  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
BY0  InChI             InChI                 1.03   "InChI=1S/C14H18BNO4S/c1-9(8-21)14(17)16-13(15(18)19)6-10-7-20-12-5-3-2-4-11(10)12/h2-5,7,9,13,18-19,21H,6,8H2,1H3,(H,16,17)/t9-,13-/m1/s1"  
BY0  InChIKey          InChI                 1.03   RHFFZKGRUWBIGC-NOZJJQNGSA-N  
BY0  SMILES_CANONICAL  CACTVS                3.385  "C[C@H](CS)C(=O)N[C@H](Cc1coc2ccccc12)B(O)O"  
BY0  SMILES            CACTVS                3.385  "C[CH](CS)C(=O)N[CH](Cc1coc2ccccc12)B(O)O"  
BY0  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "B([C@@H](Cc1coc2c1cccc2)NC(=O)[C@H](C)CS)(O)O"  
BY0  SMILES            "OpenEye OEToolkits"  2.0.6  "B(C(Cc1coc2c1cccc2)NC(=O)C(C)CS)(O)O"  
#
_pdbx_chem_comp_identifier.comp_id          BY0
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.6
_pdbx_chem_comp_identifier.identifier       "[(1~{S})-2-(1-benzofuran-3-yl)-1-[[(2~{S})-2-methyl-3-sulfanyl-propanoyl]amino]ethyl]boronic acid"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
BY0  "Create component"  2019-03-27  PDBJ  
BY0  "Initial release"   2019-07-17  RCSB  
##
