data_3D0
# 
_chem_comp.id                                    3D0 
_chem_comp.name                                  "N-[(2S)-2-[(N~2~-acetyl-D-lysyl)amino]-3-(pyridin-3-ylmethoxy)propyl]-L-allothreonyl-D-phenylalaninamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C30 H45 N7 O6" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2014-07-28 
_chem_comp.pdbx_modified_date                    2015-05-08 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        599.722 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     3D0 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4U5S 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
3D0 CBM C1  C 0 1 Y N N 2.703  28.560 3.022  -6.845 0.758  -0.292 CBM 3D0 1  
3D0 CBN C2  C 0 1 Y N N 3.532  29.577 2.535  -7.350 1.423  0.810  CBN 3D0 2  
3D0 CBO C3  C 0 1 Y N N 4.923  29.520 2.769  -7.303 0.829  2.057  CBO 3D0 3  
3D0 CBP C4  C 0 1 Y N N 5.467  28.431 3.482  -6.753 -0.431 2.203  CBP 3D0 4  
3D0 CBQ C5  C 0 1 Y N N 4.616  27.426 3.952  -6.249 -1.096 1.101  CBQ 3D0 5  
3D0 CBL C6  C 0 1 Y N N 3.226  27.473 3.723  -6.294 -0.502 -0.146 CBL 3D0 6  
3D0 CBK C7  C 0 1 N N N 2.243  26.358 4.239  -5.749 -1.229 -1.349 CBK 3D0 7  
3D0 CBG C8  C 0 1 N N R 2.309  26.181 5.778  -4.270 -0.882 -1.528 CBG 3D0 8  
3D0 CBH C9  C 0 1 N N N 1.010  25.676 6.384  -3.757 -1.511 -2.797 CBH 3D0 9  
3D0 OBJ O1  O 0 1 N N N 1.010  25.242 7.487  -2.843 -2.308 -2.753 OBJ 3D0 10 
3D0 NBI N1  N 0 1 N N N -0.234 25.722 5.612  -4.313 -1.188 -3.982 NBI 3D0 11 
3D0 NBE N2  N 0 1 N N N 2.706  27.495 6.266  -3.507 -1.394 -0.386 NBE 3D0 12 
3D0 CBD C10 C 0 1 N N N 2.402  28.199 7.525  -2.337 -0.818 -0.046 CBD 3D0 13 
3D0 OBF O2  O 0 1 N N N 1.698  27.766 8.391  -1.916 0.123  -0.684 OBF 3D0 14 
3D0 CAZ C11 C 0 1 N N S 3.072  29.580 7.637  -1.552 -1.345 1.128  CAZ 3D0 15 
3D0 CBA C12 C 0 1 N N S 4.601  29.425 7.700  -2.399 -1.238 2.397  CBA 3D0 16 
3D0 CBB C13 C 0 1 N N N 5.019  28.070 8.301  -2.646 0.236  2.724  CBB 3D0 17 
3D0 OBC O3  O 0 1 N N N 5.162  30.455 8.470  -1.709 -1.857 3.485  OBC 3D0 18 
3D0 NAY N3  N 0 1 N N N 2.566  30.314 8.794  -0.325 -0.553 1.291  NAY 3D0 19 
3D0 CAX C14 C 0 1 N N N 1.634  31.348 8.305  0.825  -1.420 1.582  CAX 3D0 20 
3D0 CAG C15 C 0 1 N N S 1.209  32.257 9.471  2.053  -0.555 1.877  CAG 3D0 21 
3D0 NAF N4  N 0 1 N N N 1.588  33.652 9.251  2.283  0.364  0.760  NAF 3D0 22 
3D0 C   C16 C 0 1 N N N 2.951  34.233 9.193  2.941  1.522  0.965  C   3D0 23 
3D0 O   O4  O 0 1 N N N 3.953  33.605 9.331  3.344  1.803  2.074  O   3D0 24 
3D0 CA  C17 C 0 1 N N R 2.979  35.744 8.974  3.177  2.468  -0.184 CA  3D0 25 
3D0 N   N5  N 0 1 N N N 2.032  36.153 9.997  4.278  3.376  0.148  N   3D0 26 
3D0 CAB C18 C 0 1 N N N 2.413  37.057 11.082 4.183  4.185  1.222  CAB 3D0 27 
3D0 OAQ O5  O 0 1 N N N 3.507  37.519 11.105 3.186  4.162  1.913  OAQ 3D0 28 
3D0 CAA C19 C 0 1 N N N 1.391  37.423 12.174 5.315  5.119  1.564  CAA 3D0 29 
3D0 CB  C20 C 0 1 N N N 2.491  36.029 7.548  1.907  3.281  -0.445 CB  3D0 30 
3D0 CG  C21 C 0 1 N N N 2.009  37.490 7.321  2.105  4.150  -1.688 CG  3D0 31 
3D0 CD  C22 C 0 1 N N N 1.580  37.736 5.846  0.835  4.963  -1.949 CD  3D0 32 
3D0 CE  C23 C 0 1 N N N 0.758  39.043 5.679  1.032  5.833  -3.193 CE  3D0 33 
3D0 NZ  N6  N 0 1 N N N -0.010 39.050 4.425  -0.187 6.613  -3.443 NZ  3D0 34 
3D0 CAH C24 C 0 1 N N N 1.780  31.771 10.811 3.278  -1.454 2.058  CAH 3D0 35 
3D0 OAI O6  O 0 1 N N N 1.343  32.649 11.848 3.431  -2.288 0.908  OAI 3D0 36 
3D0 CAJ C25 C 0 1 N N N -0.057 32.624 12.124 4.552  -3.171 0.975  CAJ 3D0 37 
3D0 CAK C26 C 0 1 Y N N -0.399 31.287 12.836 4.617  -3.998 -0.284 CAK 3D0 38 
3D0 CAL C27 C 0 1 Y N N 0.470  30.750 13.798 5.334  -3.549 -1.382 CAL 3D0 39 
3D0 CAM C28 C 0 1 Y N N 0.116  29.544 14.403 5.365  -4.343 -2.519 CAM 3D0 40 
3D0 CAN C29 C 0 1 Y N N -1.081 28.925 14.033 4.686  -5.547 -2.518 CAN 3D0 41 
3D0 NAO N7  N 0 1 Y N N -1.886 29.461 13.115 4.014  -5.941 -1.455 NAO 3D0 42 
3D0 CAP C30 C 0 1 Y N N -1.580 30.610 12.520 3.967  -5.215 -0.355 CAP 3D0 43 
3D0 H1  H1  H 0 1 N N N 1.638  28.618 2.852  -6.885 1.220  -1.267 H1  3D0 44 
3D0 H2  H2  H 0 1 N N N 3.109  30.403 1.982  -7.780 2.407  0.696  H2  3D0 45 
3D0 H3  H3  H 0 1 N N N 5.567  30.306 2.404  -7.697 1.349  2.918  H3  3D0 46 
3D0 H4  H4  H 0 1 N N N 6.530  28.374 3.663  -6.716 -0.895 3.177  H4  3D0 47 
3D0 H5  H5  H 0 1 N N N 5.033  26.596 4.503  -5.818 -2.080 1.214  H5  3D0 48 
3D0 H6  H6  H 0 1 N N N 1.216  26.635 3.959  -5.855 -2.304 -1.201 H6  3D0 49 
3D0 H7  H7  H 0 1 N N N 2.509  25.403 3.761  -6.303 -0.928 -2.237 H7  3D0 50 
3D0 H8  H8  H 0 1 N N N 3.104  25.455 6.004  -4.155 0.200  -1.586 H8  3D0 51 
3D0 H9  H9  H 0 1 N N N -1.085 25.387 6.015  -5.043 -0.551 -4.017 H9  3D0 52 
3D0 H10 H10 H 0 1 N N N -0.232 26.089 4.682  -3.982 -1.593 -4.799 H10 3D0 53 
3D0 H11 H11 H 0 1 N N N 3.287  28.010 5.636  -3.844 -2.147 0.124  H11 3D0 54 
3D0 H12 H12 H 0 1 N N N 2.829  30.146 6.725  -1.291 -2.388 0.952  H12 3D0 55 
3D0 H13 H13 H 0 1 N N N 4.990  29.475 6.672  -3.354 -1.740 2.240  H13 3D0 56 
3D0 H14 H14 H 0 1 N N N 6.117  28.003 8.327  -3.249 0.687  1.935  H14 3D0 57 
3D0 H15 H15 H 0 1 N N N 4.623  27.985 9.323  -3.174 0.315  3.674  H15 3D0 58 
3D0 H16 H16 H 0 1 N N N 4.616  27.255 7.682  -1.692 0.758  2.794  H16 3D0 59 
3D0 H17 H17 H 0 1 N N N 6.106  30.349 8.502  -0.854 -1.454 3.689  H17 3D0 60 
3D0 H18 H18 H 0 1 N N N 2.087  29.689 9.410  -0.151 0.016  0.476  H18 3D0 61 
3D0 H20 H20 H 0 1 N N N 2.132  31.953 7.533  0.602  -2.041 2.450  H20 3D0 62 
3D0 H21 H21 H 0 1 N N N 0.744  30.864 7.875  1.028  -2.057 0.721  H21 3D0 63 
3D0 H22 H22 H 0 1 N N N 0.113  32.205 9.544  1.884  0.017  2.790  H22 3D0 64 
3D0 H23 H23 H 0 1 N N N 0.833  34.295 9.124  1.961  0.140  -0.127 H23 3D0 65 
3D0 H24 H24 H 0 1 N N N 3.985  36.155 9.142  3.434  1.898  -1.077 H24 3D0 66 
3D0 H25 H25 H 0 1 N N N 1.094  35.807 9.958  5.075  3.394  -0.404 H25 3D0 67 
3D0 H26 H26 H 0 1 N N N 1.851  38.122 12.888 5.165  6.073  1.060  H26 3D0 68 
3D0 H27 H27 H 0 1 N N N 0.513  37.897 11.711 5.342  5.278  2.642  H27 3D0 69 
3D0 H28 H28 H 0 1 N N N 1.078  36.511 12.704 6.259  4.680  1.238  H28 3D0 70 
3D0 H29 H29 H 0 1 N N N 1.653  35.351 7.328  1.069  2.603  -0.605 H29 3D0 71 
3D0 H30 H30 H 0 1 N N N 3.319  35.827 6.853  1.701  3.918  0.415  H30 3D0 72 
3D0 H31 H31 H 0 1 N N N 2.829  38.178 7.572  2.943  4.828  -1.528 H31 3D0 73 
3D0 H32 H32 H 0 1 N N N 1.150  37.687 7.979  2.312  3.513  -2.548 H32 3D0 74 
3D0 H33 H33 H 0 1 N N N 0.966  36.887 5.510  -0.004 4.285  -2.109 H33 3D0 75 
3D0 H34 H34 H 0 1 N N N 2.483  37.805 5.222  0.628  5.600  -1.089 H34 3D0 76 
3D0 H35 H35 H 0 1 N N N 1.448  39.900 5.678  1.871  6.510  -3.032 H35 3D0 77 
3D0 H36 H36 H 0 1 N N N 0.060  39.135 6.524  1.239  5.196  -4.052 H36 3D0 78 
3D0 H37 H37 H 0 1 N N N -0.524 39.904 4.353  -0.082 7.196  -4.260 H37 3D0 79 
3D0 H38 H38 H 0 1 N N N 0.617  38.973 3.650  -0.991 6.010  -3.531 H38 3D0 80 
3D0 H40 H40 H 0 1 N N N 1.422  30.751 11.016 4.167  -0.836 2.180  H40 3D0 81 
3D0 H41 H41 H 0 1 N N N 2.879  31.772 10.766 3.144  -2.077 2.943  H41 3D0 82 
3D0 H42 H42 H 0 1 N N N -0.321 33.469 12.777 5.468  -2.588 1.074  H42 3D0 83 
3D0 H43 H43 H 0 1 N N N -0.621 32.697 11.183 4.445  -3.829 1.837  H43 3D0 84 
3D0 H44 H44 H 0 1 N N N 1.387  31.256 14.062 5.856  -2.604 -1.354 H44 3D0 85 
3D0 H45 H45 H 0 1 N N N 0.758  29.095 15.147 5.914  -4.025 -3.393 H45 3D0 86 
3D0 H46 H46 H 0 1 N N N -1.360 27.992 14.501 4.705  -6.171 -3.399 H46 3D0 87 
3D0 H47 H47 H 0 1 N N N -2.252 31.025 11.784 3.410  -5.573 0.498  H47 3D0 88 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
3D0 CBN CBO DOUB Y N 1  
3D0 CBN CBM SING Y N 2  
3D0 CBO CBP SING Y N 3  
3D0 CBM CBL DOUB Y N 4  
3D0 CBP CBQ DOUB Y N 5  
3D0 CBL CBQ SING Y N 6  
3D0 CBL CBK SING N N 7  
3D0 CBK CBG SING N N 8  
3D0 NZ  CE  SING N N 9  
3D0 NBI CBH SING N N 10 
3D0 CE  CD  SING N N 11 
3D0 CBG NBE SING N N 12 
3D0 CBG CBH SING N N 13 
3D0 CD  CG  SING N N 14 
3D0 NBE CBD SING N N 15 
3D0 CBH OBJ DOUB N N 16 
3D0 CG  CB  SING N N 17 
3D0 CBD CAZ SING N N 18 
3D0 CBD OBF DOUB N N 19 
3D0 CB  CA  SING N N 20 
3D0 CAZ CBA SING N N 21 
3D0 CAZ NAY SING N N 22 
3D0 CBA CBB SING N N 23 
3D0 CBA OBC SING N N 24 
3D0 CAX NAY SING N N 25 
3D0 CAX CAG SING N N 26 
3D0 CA  C   SING N N 27 
3D0 CA  N   SING N N 28 
3D0 C   NAF SING N N 29 
3D0 C   O   DOUB N N 30 
3D0 NAF CAG SING N N 31 
3D0 CAG CAH SING N N 32 
3D0 N   CAB SING N N 33 
3D0 CAH OAI SING N N 34 
3D0 CAB OAQ DOUB N N 35 
3D0 CAB CAA SING N N 36 
3D0 OAI CAJ SING N N 37 
3D0 CAJ CAK SING N N 38 
3D0 CAP CAK DOUB Y N 39 
3D0 CAP NAO SING Y N 40 
3D0 CAK CAL SING Y N 41 
3D0 NAO CAN DOUB Y N 42 
3D0 CAL CAM DOUB Y N 43 
3D0 CAN CAM SING Y N 44 
3D0 CBM H1  SING N N 45 
3D0 CBN H2  SING N N 46 
3D0 CBO H3  SING N N 47 
3D0 CBP H4  SING N N 48 
3D0 CBQ H5  SING N N 49 
3D0 CBK H6  SING N N 50 
3D0 CBK H7  SING N N 51 
3D0 CBG H8  SING N N 52 
3D0 NBI H9  SING N N 53 
3D0 NBI H10 SING N N 54 
3D0 NBE H11 SING N N 55 
3D0 CAZ H12 SING N N 56 
3D0 CBA H13 SING N N 57 
3D0 CBB H14 SING N N 58 
3D0 CBB H15 SING N N 59 
3D0 CBB H16 SING N N 60 
3D0 OBC H17 SING N N 61 
3D0 NAY H18 SING N N 62 
3D0 CAX H20 SING N N 63 
3D0 CAX H21 SING N N 64 
3D0 CAG H22 SING N N 65 
3D0 NAF H23 SING N N 66 
3D0 CA  H24 SING N N 67 
3D0 N   H25 SING N N 68 
3D0 CAA H26 SING N N 69 
3D0 CAA H27 SING N N 70 
3D0 CAA H28 SING N N 71 
3D0 CB  H29 SING N N 72 
3D0 CB  H30 SING N N 73 
3D0 CG  H31 SING N N 74 
3D0 CG  H32 SING N N 75 
3D0 CD  H33 SING N N 76 
3D0 CD  H34 SING N N 77 
3D0 CE  H35 SING N N 78 
3D0 CE  H36 SING N N 79 
3D0 NZ  H37 SING N N 80 
3D0 NZ  H38 SING N N 81 
3D0 CAH H40 SING N N 82 
3D0 CAH H41 SING N N 83 
3D0 CAJ H42 SING N N 84 
3D0 CAJ H43 SING N N 85 
3D0 CAL H44 SING N N 86 
3D0 CAM H45 SING N N 87 
3D0 CAN H46 SING N N 88 
3D0 CAP H47 SING N N 89 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
3D0 SMILES           ACDLabs              12.01 "O=C(N)C(NC(=O)C(NCC(NC(=O)C(NC(=O)C)CCCCN)COCc1cccnc1)C(O)C)Cc2ccccc2" 
3D0 InChI            InChI                1.03  
;InChI=1S/C30H45N7O6/c1-20(38)27(30(42)37-26(28(32)40)15-22-9-4-3-5-10-22)34-17-24(19-43-18-23-11-8-14-33-16-23)36-29(41)25(35-21(2)39)12-6-7-13-31/h3-5,8-11,14,16,20,24-27,34,38H,6-7,12-13,15,17-19,31H2,1-2H3,(H2,32,40)(H,35,39)(H,36,41)(H,37,42)/t20-,24-,25+,26+,27-/m0/s1
;
3D0 InChIKey         InChI                1.03  ONESZEKAUJQLFI-AMDJRULPSA-N 
3D0 SMILES_CANONICAL CACTVS               3.385 "C[C@H](O)[C@H](NC[C@@H](COCc1cccnc1)NC(=O)[C@@H](CCCCN)NC(C)=O)C(=O)N[C@H](Cc2ccccc2)C(N)=O" 
3D0 SMILES           CACTVS               3.385 "C[CH](O)[CH](NC[CH](COCc1cccnc1)NC(=O)[CH](CCCCN)NC(C)=O)C(=O)N[CH](Cc2ccccc2)C(N)=O" 
3D0 SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "C[C@@H]([C@@H](C(=O)N[C@H](Cc1ccccc1)C(=O)N)NC[C@@H](COCc2cccnc2)NC(=O)[C@@H](CCCCN)NC(=O)C)O" 
3D0 SMILES           "OpenEye OEToolkits" 1.9.2 "CC(C(C(=O)NC(Cc1ccccc1)C(=O)N)NCC(COCc2cccnc2)NC(=O)C(CCCCN)NC(=O)C)O" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
3D0 "SYSTEMATIC NAME" ACDLabs              12.01 "N-[(2S)-2-[(N~2~-acetyl-D-lysyl)amino]-3-(pyridin-3-ylmethoxy)propyl]-L-allothreonyl-D-phenylalaninamide"                                                                                               
3D0 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "(2R)-2-acetamido-6-azanyl-N-[(2S)-1-[[(2S,3S)-1-[[(2R)-1-azanyl-1-oxidanylidene-3-phenyl-propan-2-yl]amino]-3-oxidanyl-1-oxidanylidene-butan-2-yl]amino]-3-(pyridin-3-ylmethoxy)propan-2-yl]hexanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
3D0 "Create component"  2014-07-28 EBI  
3D0 "Modify descriptor" 2014-09-05 RCSB 
3D0 "Initial release"   2015-05-13 RCSB 
# 
