data_2Z0
# 
_chem_comp.id                                    2Z0 
_chem_comp.name                                  
;N-{[5-(dimethylamino)naphthalen-2-yl]sulfonyl}-L-alpha-glutamyl-N-[(1S)-4-{[amino(iminio)methyl]amino}-1-(chloroacetyl)
butyl]glycinamide
;
_chem_comp.type                                  peptide-like 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C26 H37 Cl N7 O7 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         dansyl-Glu-Gly-Arg-chloromethyl-ketone 
_chem_comp.pdbx_formal_charge                    1 
_chem_comp.pdbx_initial_date                     2008-08-28 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        627.133 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     2Z0 
_chem_comp.pdbx_model_coordinates_details        "not provided" 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        1bda 
_chem_comp.pdbx_subcomponent_list                "DSY GLU GLY AR7 0QE" 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
2Z0 C1   C1   C  0 1 Y N N N N N 13.395 53.086 36.425 4.737   0.404  1.718  C1   DSY 1  
2Z0 C2   C2   C  0 1 Y N N N N N 13.977 53.659 35.365 4.556   -0.214 0.519  C2   DSY 2  
2Z0 C3   C3   C  0 1 Y N N N N N 15.277 54.140 35.416 4.229   0.517  -0.622 C3   DSY 3  
2Z0 C4   C4   C  0 1 Y N N N N N 16.007 54.035 36.599 4.083   1.870  -0.569 C4   DSY 4  
2Z0 C4A  C4A  C  0 1 Y N N N N N 15.407 53.439 37.723 4.262   2.541  0.651  C4A  DSY 5  
2Z0 C5   C5   C  0 1 Y N N N N N 16.066 53.294 38.946 4.119   3.942  0.743  C5   DSY 6  
2Z0 C6   C6   C  0 1 Y N N N N N 15.460 52.716 40.006 4.304   4.562  1.961  C6   DSY 7  
2Z0 C7   C7   C  0 1 Y N N N N N 14.174 52.250 39.894 4.630   3.822  3.094  C7   DSY 8  
2Z0 C8   C8   C  0 1 Y N N N N N 13.472 52.360 38.728 4.774   2.470  3.033  C8   DSY 9  
2Z0 C8A  C8A  C  0 1 Y N N N N N 14.079 52.957 37.623 4.594   1.799  1.811  C8A  DSY 10 
2Z0 N    N    N  0 1 N N N N N N 17.418 53.729 39.236 3.794   4.692  -0.385 N    DSY 11 
2Z0 CM1  CM1  C  0 1 N N N N N N 18.551 52.930 38.682 2.529   5.414  -0.191 CM1  DSY 12 
2Z0 CM2  CM2  C  0 1 N N N N N N 17.580 54.929 40.105 4.880   5.617  -0.733 CM2  DSY 13 
2Z0 S    S    S  0 1 N N N N N N 12.898 53.659 34.097 4.737   -1.963 0.407  S    DSY 14 
2Z0 O1S  O1S  O  0 1 N N N N N N 11.408 53.753 34.708 5.043   -2.248 -0.951 O1S  DSY 15 
2Z0 O2S  O2S  O  0 1 N N N N N N 13.195 54.875 33.118 5.572   -2.350 1.490  O3S  DSY 16 
2Z0 N1   N1   N  0 1 N N N N N N 12.595 52.026 33.968 3.250   -2.630 0.701  N    GLU 17 
2Z0 CA   CA   C  0 1 N N S N N N 13.411 51.532 32.882 2.143   -2.389 -0.227 CA   GLU 18 
2Z0 C    C    C  0 1 N N N N N N 12.772 51.916 31.569 1.073   -1.585 0.465  C    GLU 19 
2Z0 O    O    O  0 1 N N N N N N 11.543 52.020 31.468 1.221   -1.245 1.619  O    GLU 20 
2Z0 CB   CB   C  0 1 N N N N N N 13.548 50.011 32.937 1.560   -3.728 -0.683 CB   GLU 21 
2Z0 CG   CG   C  0 1 N N N N N N 14.398 49.509 34.067 2.605   -4.489 -1.501 CG   GLU 22 
2Z0 CD   CD   C  0 1 N N N N N N 13.609 48.726 35.073 2.071   -5.852 -1.858 CD   GLU 23 
2Z0 OE1  OE1  O  0 1 N N N N N N 12.925 49.375 35.895 0.966   -6.181 -1.495 OE1  GLU 24 
2Z0 OE2  OE2  O  0 1 N N N N N N 13.680 47.470 35.041 2.821   -6.699 -2.579 OE2  GLU 25 
2Z0 N2   N2   N  0 1 N N N N N N 13.615 52.191 30.583 -0.048  -1.242 -0.200 N    GLY 26 
2Z0 CA1  CA1  C  0 1 N N N N N N 13.120 52.519 29.258 -1.088  -0.460 0.472  CA   GLY 27 
2Z0 C9   C9   C  0 1 N N N N N N 12.592 51.242 28.624 -2.227  -0.212 -0.483 C    GLY 28 
2Z0 O1   O1   O  0 1 N N N N N N 12.784 50.128 29.155 -2.175  -0.647 -1.614 O    GLY 29 
2Z0 O2   O2   O  0 1 N N N N N N 11.560 48.994 24.783 -3.228  2.704  -1.517 O    AR7 30 
2Z0 N3   N3   N  0 1 N N N N N N 11.924 51.397 27.491 -3.304  0.492  -0.081 N    AR7 31 
2Z0 CA2  CA2  C  0 1 N N S N N N 11.366 50.252 26.809 -4.411  0.732  -1.009 CA   AR7 32 
2Z0 CC   CC   C  0 1 N N N N N N 11.563 50.358 25.310 -4.109  1.948  -1.847 C    AR7 33 
2Z0 CB1  CB1  C  0 1 N N N N N N 9.893  50.080 27.211 -5.699  0.965  -0.218 CB   AR7 34 
2Z0 CG1  CG1  C  0 1 N N N N N N 9.635  49.809 28.701 -6.073  -0.313 0.536  CG   AR7 35 
2Z0 CD1  CD1  C  0 1 N N N N N N 8.148  49.622 28.929 -7.361  -0.080 1.328  CD   AR7 36 
2Z0 NE   NE   N  0 1 N N N N N N 7.801  49.281 30.308 -7.719  -1.304 2.049  NE   AR7 37 
2Z0 CZ   CZ   C  0 1 N N N N N N 6.549  49.191 30.762 -8.842  -1.334 2.830  CZ   AR7 38 
2Z0 NH2  NH2  N  1 1 N N N N N N 6.326  48.851 32.020 -9.167  -2.447 3.486  NH1  AR7 39 
2Z0 NH1  NH1  N  0 1 N N N N N N 5.516  49.414 29.956 -9.610  -0.250 2.934  NH2  AR7 40 
2Z0 CE   CE   C  0 1 N N N N N N 12.825 51.260 24.963 -4.908  2.219  -3.096 C1   0QE 41 
2Z0 CL1  CL1  CL 0 0 N Y N N N N 14.305 50.404 25.421 -4.313  3.735  -3.872 CL1  0QE 42 
2Z0 H1   H1   H  0 1 N N N N N N 12.382 52.720 36.346 4.986   -0.176 2.595  H1   DSY 43 
2Z0 H3   H3   H  0 1 N N N N N N 15.722 54.594 34.543 4.091   0.003  -1.561 H3   DSY 44 
2Z0 H4   H4   H  0 1 N N N N N N 17.020 54.406 36.652 3.830   2.423  -1.461 H4   DSY 45 
2Z0 H6   H6   H  0 1 N N N N N N 15.988 52.620 40.943 4.196   5.634  2.036  H6   DSY 46 
2Z0 H7   H7   H  0 1 N N N N N N 13.706 51.785 40.749 4.771   4.329  4.037  H7   DSY 47 
2Z0 H8   H8   H  0 1 N N N N N N 12.460 51.990 38.662 5.028   1.913  3.922  H8   DSY 48 
2Z0 HM11 HM11 H  0 0 N N N N N N 19.505 53.385 38.988 2.622   6.087  0.661  HM11 DSY 49 
2Z0 HM12 HM12 H  0 0 N N N N N N 18.496 51.901 39.066 2.299   5.991  -1.086 HM12 DSY 50 
2Z0 HM13 HM13 H  0 0 N N N N N N 18.487 52.916 37.584 1.728   4.699  -0.003 HM13 DSY 51 
2Z0 HM21 HM21 H  0 0 N N N N N N 18.651 55.143 40.240 5.788   5.050  -0.940 HM21 DSY 52 
2Z0 HM22 HM22 H  0 0 N N N N N N 17.090 55.793 39.632 4.600   6.190  -1.617 HM22 DSY 53 
2Z0 HM23 HM23 H  0 0 N N N N N N 17.118 54.737 41.085 5.059   6.298  0.100  HM23 DSY 54 
2Z0 H    H    H  0 1 N N N N N N 12.832 51.560 34.821 3.112   -3.179 1.489  H    GLU 55 
2Z0 HA   HA   H  0 1 N N N N N N 14.413 51.977 32.974 2.509   -1.839 -1.094 HA   GLU 56 
2Z0 HB2  HB2  H  0 1 N N N N N N 12.541 49.585 33.056 1.281   -4.319 0.190  HB2  GLU 57 
2Z0 HB3  HB3  H  0 1 N N N N N N 14.008 49.679 31.995 0.677   -3.550 -1.297 HB3  GLU 58 
2Z0 HG2  HG2  H  0 1 N N N N N N 15.180 48.856 33.652 2.826   -3.934 -2.413 HG2  GLU 59 
2Z0 HG3  HG3  H  0 1 N N N N N N 14.850 50.374 34.575 3.517   -4.598 -0.913 HG3  GLU 60 
2Z0 HE2  HE2  H  0 1 N N N N N N 13.139 47.104 35.731 2.435   -7.562 -2.783 HE2  GLU 61 
2Z0 H2   H2   H  0 1 N N N N N N 14.600 52.172 30.753 -0.166  -1.513 -1.124 H    GLY 62 
2Z0 HA2  HA2  H  0 1 N N N N N N 12.313 53.263 29.332 -1.454  -1.010 1.339  HA2  GLY 63 
2Z0 HA3  HA3  H  0 1 N N N N N N 13.934 52.934 28.645 -0.673  0.494  0.797  HA3  GLY 64 
2Z0 H5   H5   H  0 1 N N N N N N 11.805 52.312 27.105 -3.345  0.839  0.824  H    AR7 65 
2Z0 HA1  HA1  H  0 1 N N N N N N 11.902 49.343 27.118 -4.536  -0.135 -1.658 HA   AR7 66 
2Z0 HB21 HB21 H  0 0 N N N N N N 9.369  51.011 26.950 -5.546  1.775  0.495  HB1  AR7 67 
2Z0 HB31 HB31 H  0 0 N N N N N N 9.495  49.224 26.647 -6.504  1.231  -0.903 HB2  AR7 68 
2Z0 HG21 HG21 H  0 0 N N N N N N 10.171 48.898 29.006 -6.226  -1.123 -0.177 HG1  AR7 69 
2Z0 HG31 HG31 H  0 0 N N N N N N 9.993  50.662 29.297 -5.269  -0.579 1.221  HG2  AR7 70 
2Z0 HD2  HD2  H  0 1 N N N N N N 7.643  50.565 28.673 -7.208  0.730  2.040  HD1  AR7 71 
2Z0 HD3  HD3  H  0 1 N N N N N N 7.803  48.805 28.279 -8.166  0.186  0.642  HD2  AR7 72 
2Z0 HE   HE   H  0 1 N N N N N N 8.547  49.104 30.950 -7.160  -2.093 1.973  HNE  AR7 73 
2Z0 HH21 HH21 H  0 0 N N N N N N 5.388  48.764 32.356 -9.964  -2.468 4.040  HN11 AR7 74 
2Z0 HH11 HH11 H  0 0 N N N N N N 4.582  49.324 30.303 -9.373  0.560  2.457  HN21 AR7 75 
2Z0 HH12 HH12 H  0 0 N N N N N N 5.672  49.672 29.003 -10.406 -0.272 3.488  HN22 AR7 76 
2Z0 HH22 HH22 H  0 0 N N N N N N 7.095  48.681 32.636 -8.608  -3.235 3.410  HN12 AR7 77 
2Z0 H11  H11  H  0 1 N N N N N N 12.841 51.468 23.883 -4.792  1.387  -3.789 H    0QE 78 
2Z0 H21  H21  H  0 1 N N N N N N 12.762 52.207 25.518 -5.960  2.333  -2.837 HA   0QE 79 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
2Z0 C1  C2   DOUB Y N 1  
2Z0 C1  C8A  SING Y N 2  
2Z0 C1  H1   SING N N 3  
2Z0 C2  C3   SING Y N 4  
2Z0 C2  S    SING N N 5  
2Z0 C3  C4   DOUB Y N 6  
2Z0 C3  H3   SING N N 7  
2Z0 C4  C4A  SING Y N 8  
2Z0 C4  H4   SING N N 9  
2Z0 C4A C5   DOUB Y N 10 
2Z0 C4A C8A  SING Y N 11 
2Z0 C5  C6   SING Y N 12 
2Z0 C5  N    SING N N 13 
2Z0 C6  C7   DOUB Y N 14 
2Z0 C6  H6   SING N N 15 
2Z0 C7  C8   SING Y N 16 
2Z0 C7  H7   SING N N 17 
2Z0 C8  C8A  DOUB Y N 18 
2Z0 C8  H8   SING N N 19 
2Z0 N   CM1  SING N N 20 
2Z0 N   CM2  SING N N 21 
2Z0 CM1 HM11 SING N N 22 
2Z0 CM1 HM12 SING N N 23 
2Z0 CM1 HM13 SING N N 24 
2Z0 CM2 HM21 SING N N 25 
2Z0 CM2 HM22 SING N N 26 
2Z0 CM2 HM23 SING N N 27 
2Z0 S   O1S  DOUB N N 28 
2Z0 S   N1   SING N N 29 
2Z0 S   O2S  DOUB N N 30 
2Z0 N1  CA   SING N N 31 
2Z0 N1  H    SING N N 32 
2Z0 CA  C    SING N N 33 
2Z0 CA  CB   SING N N 34 
2Z0 CA  HA   SING N N 35 
2Z0 C   O    DOUB N N 36 
2Z0 C   N2   SING N N 37 
2Z0 CB  CG   SING N N 38 
2Z0 CB  HB2  SING N N 39 
2Z0 CB  HB3  SING N N 40 
2Z0 CG  CD   SING N N 41 
2Z0 CG  HG2  SING N N 42 
2Z0 CG  HG3  SING N N 43 
2Z0 CD  OE1  DOUB N N 44 
2Z0 CD  OE2  SING N N 45 
2Z0 OE2 HE2  SING N N 46 
2Z0 N2  CA1  SING N N 47 
2Z0 N2  H2   SING N N 48 
2Z0 CA1 C9   SING N N 49 
2Z0 CA1 HA2  SING N N 50 
2Z0 CA1 HA3  SING N N 51 
2Z0 C9  O1   DOUB N N 52 
2Z0 C9  N3   SING N N 53 
2Z0 N3  CA2  SING N N 54 
2Z0 N3  H5   SING N N 55 
2Z0 CA2 CC   SING N N 56 
2Z0 CA2 CB1  SING N N 57 
2Z0 CA2 HA1  SING N N 58 
2Z0 CC  O2   DOUB N N 59 
2Z0 CC  CE   SING N N 60 
2Z0 CB1 CG1  SING N N 61 
2Z0 CB1 HB21 SING N N 62 
2Z0 CB1 HB31 SING N N 63 
2Z0 CG1 CD1  SING N N 64 
2Z0 CG1 HG21 SING N N 65 
2Z0 CG1 HG31 SING N N 66 
2Z0 CD1 NE   SING N N 67 
2Z0 CD1 HD2  SING N N 68 
2Z0 CD1 HD3  SING N N 69 
2Z0 NE  CZ   SING N N 70 
2Z0 NE  HE   SING N N 71 
2Z0 CZ  NH1  SING N N 72 
2Z0 CZ  NH2  DOUB N N 73 
2Z0 NH1 HH11 SING N N 74 
2Z0 NH1 HH12 SING N N 75 
2Z0 NH2 HH21 SING N N 76 
2Z0 NH2 HH22 SING N N 77 
2Z0 CE  H11  SING N N 78 
2Z0 CE  H21  SING N N 79 
2Z0 CL1 CE   SING N N 80 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
2Z0 SMILES           ACDLabs              12.01 "ClCC(=O)C(NC(=O)CNC(=O)C(NS(=O)(=O)c2ccc1c(cccc1N(C)C)c2)CCC(=O)O)CCCNC(=[NH2+])\\N"                                                                                                                                                                          
2Z0 InChI            InChI                1.03  "InChI=1S/C26H36ClN7O7S/c1-34(2)21-7-3-5-16-13-17(8-9-18(16)21)42(40,41)33-20(10-11-24(37)38)25(39)31-15-23(36)32-19(22(35)14-27)6-4-12-30-26(28)29/h3,5,7-9,13,19-20,33H,4,6,10-12,14-15H2,1-2H3,(H,31,39)(H,32,36)(H,37,38)(H4,28,29,30)/p+1/t19-,20-/m0/s1" 
2Z0 InChIKey         InChI                1.03  VKQAIOBCWDJDIP-PMACEKPBSA-O                                                                                                                                                                                                                                    
2Z0 SMILES_CANONICAL CACTVS               3.385 "CN(C)c1cccc2cc(ccc12)[S](=O)(=O)N[C@@H](CCC(O)=O)C(=O)NCC(=O)N[C@@H](CCCNC(N)=[NH2+])C(=O)CCl"                                                                                                                                                                
2Z0 SMILES           CACTVS               3.385 "CN(C)c1cccc2cc(ccc12)[S](=O)(=O)N[CH](CCC(O)=O)C(=O)NCC(=O)N[CH](CCCNC(N)=[NH2+])C(=O)CCl"                                                                                                                                                                    
2Z0 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.5 "CN(C)c1cccc2c1ccc(c2)S(=O)(=O)N[C@@H](CCC(=O)O)C(=O)NCC(=O)N[C@@H](CCCNC(=[NH2+])N)C(=O)CCl"                                                                                                                                                                  
2Z0 SMILES           "OpenEye OEToolkits" 1.7.5 "CN(C)c1cccc2c1ccc(c2)S(=O)(=O)NC(CCC(=O)O)C(=O)NCC(=O)NC(CCCNC(=[NH2+])N)C(=O)CCl"                                                                                                                                                                            
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
2Z0 "SYSTEMATIC NAME" ACDLabs              12.01 "N-{[5-(dimethylamino)naphthalen-2-yl]sulfonyl}-L-alpha-glutamyl-N-[(3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-oxohexan-3-yl]glycinamide"                                  
2Z0 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "[azanyl-[[(4S)-6-chloro-4-[2-[[(2S)-2-[[5-(dimethylamino)naphthalen-2-yl]sulfonylamino]-5-hydroxy-5-oxo-pentanoyl]amino]ethanoylamino]-5-oxo-hexyl]amino]methylidene]azanium" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
2Z0 "Create component"   2008-08-28 RCSB 
2Z0 "Other modification" 2011-01-18 RCSB 
2Z0 "Modify descriptor"  2011-06-04 RCSB 
2Z0 "Modify descriptor"  2012-01-05 RCSB 
2Z0 "Modify synonyms"    2020-06-05 PDBE 
2Z0 "Modify PCM"         2024-09-27 PDBE 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      2Z0 
_pdbx_chem_comp_synonyms.name         dansyl-Glu-Gly-Arg-chloromethyl-ketone 
_pdbx_chem_comp_synonyms.provenance   ? 
_pdbx_chem_comp_synonyms.type         ? 
# 
loop_
_pdbx_chem_comp_pcm.pcm_id 
_pdbx_chem_comp_pcm.comp_id 
_pdbx_chem_comp_pcm.modified_residue_id 
_pdbx_chem_comp_pcm.type 
_pdbx_chem_comp_pcm.category 
_pdbx_chem_comp_pcm.position 
_pdbx_chem_comp_pcm.polypeptide_position 
_pdbx_chem_comp_pcm.comp_id_linking_atom 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession 
1 2Z0 HIS None "Covalent chemical modification" "Amino-acid side chain" "Any position" CE NE2 ? ? 
2 2Z0 SER None "Covalent chemical modification" "Amino-acid side chain" "Any position" CC OG  ? ? 
# 
