data_PRDCC_002404
# 
_chem_comp.id                                    PRD_002404 
_chem_comp.name                                  "Dynobactin A" 
_chem_comp.formula                               "C60 H78 N18 O16" 
_chem_comp.formula_weight                        1307.372 
_chem_comp.pdbx_release_status                   REF_ONLY 
_chem_comp.type                                  peptide-like 
_chem_comp.pdbx_type                             ? 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    ? 
_chem_comp.pdbx_initial_date                     ? 
_chem_comp.pdbx_modified_date                    ? 
_chem_comp.pdbx_ambiguous_flag                   ? 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     ? 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   ? 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   ? 
_chem_comp.pdbx_model_coordinates_db_code        ? 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_pcm                              ? 
_chem_comp.pdbx_processing_site                  ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_residue_numbering 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_polymer_type 
_chem_comp_atom.pdbx_ref_id 
_chem_comp_atom.pdbx_component_id 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.pdbx_ordinal 
PRD_002404 N1  N1  N 0 1 N N N -3.733  16.832 32.289 12.135  1.812  2.424  TRP 1  N    polymer 1 1 Y Y N 1   
PRD_002404 C1  C1  C 0 1 N N S -4.547  15.779 32.902 12.215  0.825  1.339  TRP 1  CA   polymer 1 1 Y N N 2   
PRD_002404 C2  C2  C 0 1 N N N -3.634  14.631 33.318 11.119  1.090  0.339  TRP 1  C    polymer 1 1 Y N Y 3   
PRD_002404 O1  O1  O 0 1 N N N -2.662  14.337 32.618 10.482  0.176  -0.142 TRP 1  O    polymer 1 1 Y N Y 4   
PRD_002404 C3  C3  C 0 1 N N N -5.615  15.300 31.914 12.055  -0.581 1.918  TRP 1  CB   polymer 1 1 N N N 5   
PRD_002404 C4  C4  C 0 1 Y N N -6.538  14.238 32.443 11.003  -1.331 1.143  TRP 1  CG   polymer 1 1 N N N 6   
PRD_002404 C5  C5  C 0 1 Y N N -7.806  14.411 32.913 11.205  -2.115 0.072  TRP 1  CD1  polymer 1 1 N N N 7   
PRD_002404 C6  C6  C 0 1 Y N N -6.302  12.819 32.439 9.564   -1.345 1.416  TRP 1  CD2  polymer 1 1 N N N 8   
PRD_002404 N2  N2  N 0 1 Y N N -8.371  13.191 33.216 10.013  -2.622 -0.367 TRP 1  NE1  polymer 1 1 N N N 9   
PRD_002404 C7  C7  C 0 1 Y N N -7.465  12.200 32.941 8.987   -2.157 0.424  TRP 1  CE2  polymer 1 1 N N N 10  
PRD_002404 C8  C8  C 0 1 Y N N -5.241  12.013 32.009 8.756   -0.758 2.393  TRP 1  CE3  polymer 1 1 N N N 11  
PRD_002404 C9  C9  C 0 1 Y N N -7.570  10.822 33.082 7.606   -2.332 0.405  TRP 1  CZ2  polymer 1 1 N N N 12  
PRD_002404 C10 C10 C 0 1 Y N N -5.315  10.657 32.219 7.403   -0.946 2.357  TRP 1  CZ3  polymer 1 1 N N N 13  
PRD_002404 C11 C11 C 0 1 Y N N -6.495  10.065 32.687 6.825   -1.718 1.359  TRP 1  CH2  polymer 1 1 N N N 14  
PRD_002404 N3  N3  N 0 1 N N N -3.942  13.974 34.440 10.860  2.389  -0.014 ASN 2  N    polymer 1 1 Y Y N 15  
PRD_002404 C12 C12 C 0 1 N N S -3.111  12.881 34.927 9.783   2.552  -1.019 ASN 2  CA   polymer 1 1 Y N N 16  
PRD_002404 C13 C13 C 0 1 N N N -3.928  11.720 35.558 8.455   2.570  -0.307 ASN 2  C    polymer 1 1 Y N Y 17  
PRD_002404 O2  O2  O 0 1 N N N -5.135  11.844 35.767 8.402   2.466  0.900  ASN 2  O    polymer 1 1 Y N Y 18  
PRD_002404 C14 C14 C 0 1 N N N -2.092  13.442 35.912 9.820   1.383  -2.005 ASN 2  CB   polymer 1 1 N N N 19  
PRD_002404 C15 C15 C 0 1 N N N -2.746  14.008 37.139 11.216  1.232  -2.553 ASN 2  CG   polymer 1 1 N N N 20  
PRD_002404 O3  O3  O 0 1 N N N -2.905  13.318 38.161 12.095  1.985  -2.190 ASN 2  OD1  polymer 1 1 N N N 21  
PRD_002404 N4  N4  N 0 1 N N N -3.167  15.268 37.057 11.488  0.260  -3.446 ASN 2  ND2  polymer 1 1 N N N 22  
PRD_002404 N5  N5  N 0 1 N N N -3.228  10.589 35.809 7.314   2.706  -1.043 SER 3  N    polymer 1 1 Y Y N 23  
PRD_002404 C16 C16 C 0 1 N N S -3.678  9.338  36.434 6.049   2.718  -0.283 SER 3  CA   polymer 1 1 Y N N 24  
PRD_002404 C17 C17 C 0 1 N N N -5.110  8.926  36.095 5.366   1.383  -0.437 SER 3  C    polymer 1 1 Y N Y 25  
PRD_002404 O4  O4  O 0 1 N N N -5.967  8.767  36.977 4.705   1.135  -1.423 SER 3  O    polymer 1 1 Y N Y 26  
PRD_002404 C18 C18 C 0 1 N N N -3.464  9.369  37.946 5.139   3.822  -0.824 SER 3  CB   polymer 1 1 N N N 27  
PRD_002404 O5  O5  O 0 1 N N N -3.650  10.643 38.539 5.738   5.096  -0.579 SER 3  OG   polymer 1 1 N N N 28  
PRD_002404 N6  N6  N 0 1 N N N -5.317  8.652  34.805 5.510   0.455  0.560  ASN 4  N    polymer 1 1 Y Y N 29  
PRD_002404 C19 C19 C 0 1 N N S -6.604  8.251  34.268 4.760   -0.807 0.349  ASN 4  CA   polymer 1 1 Y N N 30  
PRD_002404 C20 C20 C 0 1 N N N -6.967  6.797  34.554 3.299   -0.586 0.644  ASN 4  C    polymer 1 1 Y N Y 31  
PRD_002404 O6  O6  O 0 1 N N N -8.152  6.462  34.487 2.954   0.356  1.325  ASN 4  O    polymer 1 1 Y N Y 32  
PRD_002404 C21 C21 C 0 1 N N N -6.679  8.532  32.767 5.326   -1.865 1.302  ASN 4  CB   polymer 1 1 N N N 33  
PRD_002404 C22 C22 C 0 1 N N N -5.668  7.773  31.956 4.746   -1.665 2.679  ASN 4  CG   polymer 1 1 N N N 34  
PRD_002404 O7  O7  O 0 1 N N N -4.542  7.576  32.399 3.950   -0.773 2.878  ASN 4  OD1  polymer 1 1 N N N 35  
PRD_002404 N7  N7  N 0 1 N N N -6.013  7.375  30.734 5.114   -2.478 3.689  ASN 4  ND2  polymer 1 1 N N N 36  
PRD_002404 N8  N8  N 0 1 N N N -5.991  5.941  34.898 2.375   -1.436 0.152  VAL 5  N    polymer 1 1 Y Y N 37  
PRD_002404 C23 C23 C 0 1 N N S -6.288  4.555  35.222 0.955   -1.220 0.440  VAL 5  CA   polymer 1 1 Y N N 38  
PRD_002404 C24 C24 C 0 1 N N N -6.645  4.490  36.691 0.219   -2.532 0.343  VAL 5  C    polymer 1 1 Y N Y 39  
PRD_002404 O8  O8  O 0 1 N N N -7.682  3.916  37.035 0.644   -3.415 -0.371 VAL 5  O    polymer 1 1 Y N Y 40  
PRD_002404 C25 C25 C 0 1 N N N -5.139  3.609  34.861 0.373   -0.233 -0.574 VAL 5  CB   polymer 1 1 N N N 41  
PRD_002404 C26 C26 C 0 1 N N N -5.471  2.175  35.290 0.993   1.148  -0.354 VAL 5  CG1  polymer 1 1 N N N 42  
PRD_002404 C27 C27 C 0 1 N N N -4.835  3.680  33.365 0.688   -0.713 -1.992 VAL 5  CG2  polymer 1 1 N N N 43  
PRD_002404 N9  N9  N 0 1 N N N -5.824  5.090  37.561 -0.913  -2.723 1.050  HIS 6  N    polymer 1 1 Y Y N 44  
PRD_002404 C28 C28 C 0 1 N N S -6.149  5.146  38.985 -1.658  -3.973 0.912  HIS 6  CA   polymer 1 1 Y N N 45  
PRD_002404 C29 C29 C 0 1 N N N -5.432  6.286  39.731 -2.603  -3.904 -0.268 HIS 6  C    polymer 1 1 Y N Y 46  
PRD_002404 O9  O9  O 0 1 N N N -4.200  6.333  39.767 -3.459  -4.764 -0.357 HIS 6  O    polymer 1 1 Y N Y 47  
PRD_002404 C30 C30 C 0 1 N N N -5.893  3.802  39.696 -2.462  -4.224 2.195  HIS 6  CB   polymer 1 1 N N N 48  
PRD_002404 C31 C31 C 0 1 Y N N -6.028  3.882  41.190 -3.681  -3.339 2.179  HIS 6  CG   polymer 1 1 N N N 49  
PRD_002404 N10 N10 N 1 1 Y N N -7.250  3.694  41.818 -3.825  -2.164 2.808  HIS 6  ND1  polymer 1 1 N N N 50  
PRD_002404 C32 C32 C 0 1 Y N N -5.095  4.174  42.132 -4.846  -3.624 1.568  HIS 6  CD2  polymer 1 1 N N N 51  
PRD_002404 C33 C33 C 0 1 Y N N -7.027  3.879  43.114 -5.000  -1.668 2.527  HIS 6  CE1  polymer 1 1 N N N 52  
PRD_002404 N11 N11 N 0 1 Y N N -5.743  4.171  43.353 -5.625  -2.505 1.671  HIS 6  NE2  polymer 1 1 N N N 53  
PRD_002404 N12 N12 N 0 1 N N N -6.220  7.139  40.399 -2.463  -2.891 -1.171 SER 7  N    polymer 1 1 Y Y N 54  
PRD_002404 C34 C34 C 0 1 N N S -5.734  8.199  41.271 -3.306  -2.875 -2.385 SER 7  CA   polymer 1 1 Y N N 55  
PRD_002404 C35 C35 C 0 1 N N N -6.171  7.725  42.668 -4.659  -2.284 -2.091 SER 7  C    polymer 1 1 Y N Y 56  
PRD_002404 O10 O10 O 0 1 N N N -7.283  8.024  43.092 -5.160  -1.527 -2.904 SER 7  O    polymer 1 1 Y N Y 57  
PRD_002404 C36 C36 C 0 1 N N N -6.381  9.534  40.899 -3.434  -4.242 -3.045 SER 7  CB   polymer 1 1 N N N 58  
PRD_002404 O11 O11 O 0 1 N N N -6.135  10.535 41.878 -2.156  -4.659 -3.530 SER 7  OG   polymer 1 1 N N N 59  
PRD_002404 N13 N13 N 0 1 N N N -5.345  6.917  43.340 -5.316  -2.630 -0.950 TYR 8  N    polymer 1 1 Y Y N 60  
PRD_002404 C37 C37 C 0 1 N N S -5.726  6.297  44.615 -6.456  -1.804 -0.509 TYR 8  CA   polymer 1 1 Y N N 61  
PRD_002404 C38 C38 C 0 1 N N N -5.047  6.907  45.836 -6.069  -0.345 -0.471 TYR 8  C    polymer 1 1 Y N Y 62  
PRD_002404 O12 O12 O 0 1 N N N -3.847  6.754  45.999 -4.900  -0.030 -0.421 TYR 8  O    polymer 1 1 Y N Y 63  
PRD_002404 C39 C39 C 0 1 N N N -5.440  4.786  44.553 -6.849  -2.232 0.914  TYR 8  CB   polymer 1 1 N N N 64  
PRD_002404 C40 C40 C 0 1 Y N N -5.750  4.037  45.831 -7.712  -3.462 0.854  TYR 8  CG   polymer 1 1 N N N 65  
PRD_002404 C41 C41 C 0 1 Y N N -6.923  4.275  46.535 -8.851  -3.545 1.633  TYR 8  CD1  polymer 1 1 N N N 66  
PRD_002404 C42 C42 C 0 1 Y N N -4.935  3.005  46.268 -7.368  -4.505 0.014  TYR 8  CD2  polymer 1 1 N N N 67  
PRD_002404 C43 C43 C 0 1 Y N N -7.212  3.592  47.710 -9.645  -4.674 1.579  TYR 8  CE1  polymer 1 1 N N N 68  
PRD_002404 C44 C44 C 0 1 Y N N -5.239  2.280  47.415 -8.159  -5.636 -0.043 TYR 8  CE2  polymer 1 1 N N N 69  
PRD_002404 C45 C45 C 0 1 Y N N -6.384  2.573  48.133 -9.299  -5.725 0.742  TYR 8  CZ   polymer 1 1 N N N 70  
PRD_002404 O13 O13 O 0 1 N N N -6.699  1.885  49.284 -10.079 -6.836 0.688  TYR 8  OH   polymer 1 1 N N N 71  
PRD_002404 N14 N14 N 0 1 N N N -5.828  7.467  46.753 -7.024  0.606  -0.494 ARG 9  N    polymer 1 1 Y Y N 72  
PRD_002404 C46 C46 C 0 1 N N S -5.299  8.077  47.973 -6.648  2.021  -0.458 ARG 9  CA   polymer 1 1 Y N N 73  
PRD_002404 C47 C47 C 0 1 N N N -5.669  7.207  49.190 -7.787  2.829  0.111  ARG 9  C    polymer 1 1 Y N Y 74  
PRD_002404 O14 O14 O 0 1 N N N -6.777  6.681  49.254 -8.811  2.276  0.453  ARG 9  O    polymer 1 1 Y N Y 75  
PRD_002404 C48 C48 C 0 1 N N N -5.746  9.556  48.127 -6.340  2.504  -1.877 ARG 9  CB   polymer 1 1 N N N 76  
PRD_002404 C49 C49 C 0 1 N N N -7.244  9.845  47.945 -5.107  1.771  -2.408 ARG 9  CG   polymer 1 1 N N N 77  
PRD_002404 C50 C50 C 0 1 N N N -7.700  10.042 46.489 -4.798  2.253  -3.827 ARG 9  CD   polymer 1 1 N N N 78  
PRD_002404 N15 N15 N 0 1 N N N -8.949  10.807 46.393 -3.617  1.552  -4.335 ARG 9  NE   polymer 1 1 N N N 79  
PRD_002404 C51 C51 C 0 1 N N N -9.718  10.892 45.304 -3.150  1.821  -5.593 ARG 9  CZ   polymer 1 1 N N N 80  
PRD_002404 N16 N16 N 0 1 N N N -10.831 11.621 45.324 -3.770  2.721  -6.354 ARG 9  NH1  polymer 1 1 N N N 81  
PRD_002404 N17 N17 N 1 1 N N N -9.384  10.244 44.188 -2.076  1.183  -6.055 ARG 9  NH2  polymer 1 1 N N N 82  
PRD_002404 N18 N18 N 0 1 N N N -4.729  7.027  50.125 -7.667  4.165  0.240  PHE 10 N    polymer 1 1 Y Y N 83  
PRD_002404 C52 C52 C 0 1 N N S -4.939  6.170  51.298 -8.773  4.950  0.794  PHE 10 CA   polymer 1 1 Y N N 84  
PRD_002404 C53 C53 C 0 1 N N N -4.304  6.733  52.596 -9.747  5.289  -0.305 PHE 10 C    polymer 1 1 Y N Y 85  
PRD_002404 O15 O15 O 0 1 N N N -3.646  7.799  52.539 -9.538  4.913  -1.435 PHE 10 O    polymer 1 1 Y N Y 86  
PRD_002404 C54 C54 C 0 1 N N N -4.423  4.744  50.999 -8.226  6.240  1.407  PHE 10 CB   polymer 1 1 N N N 87  
PRD_002404 C55 C55 C 0 1 Y N N -3.082  4.675  50.310 -7.348  5.905  2.584  PHE 10 CG   polymer 1 1 N N N 88  
PRD_002404 C56 C56 C 0 1 Y N N -1.907  4.663  51.041 -5.995  5.692  2.399  PHE 10 CD1  polymer 1 1 N N N 89  
PRD_002404 C57 C57 C 0 1 Y N N -2.996  4.630  48.929 -7.895  5.814  3.851  PHE 10 CD2  polymer 1 1 N N N 90  
PRD_002404 C58 C58 C 0 1 Y N N -0.674  4.596  50.402 -5.189  5.384  3.479  PHE 10 CE1  polymer 1 1 N N N 91  
PRD_002404 C59 C59 C 0 1 Y N N -1.763  4.526  48.298 -7.089  5.506  4.931  PHE 10 CE2  polymer 1 1 N N N 92  
PRD_002404 C60 C60 C 0 1 Y N N -0.612  4.540  49.036 -5.737  5.289  4.745  PHE 10 CZ   polymer 1 1 N N N 93  
PRD_002404 O16 O16 O 0 1 N Y N -4.481  6.114  53.677 -10.846 6.008  -0.030 PHE 10 OXT  polymer 1 1 Y N Y 94  
PRD_002404 H1  H1  H 0 1 N N N -4.322  17.591 32.012 12.241  2.750  2.068  TRP 1  H    polymer 1 1 Y Y N 95  
PRD_002404 H2  H2  H 0 1 N Y N -3.058  17.159 32.950 11.271  1.716  2.937  TRP 1  H2   polymer 1 1 Y Y N 96  
PRD_002404 H3  H3  H 0 1 N N N -5.048  16.175 33.798 13.183  0.906  0.845  TRP 1  HA   polymer 1 1 Y N N 97  
PRD_002404 H4  H4  H 0 1 N N N -6.225  16.168 31.623 13.005  -1.112 1.848  TRP 1  HB2  polymer 1 1 N N N 98  
PRD_002404 H5  H5  H 0 1 N N N -5.104  14.897 31.027 11.755  -0.512 2.963  TRP 1  HB3  polymer 1 1 N N N 99  
PRD_002404 H6  H6  H 0 1 N N N -8.297  15.366 33.031 12.167  -2.316 -0.377 TRP 1  HD1  polymer 1 1 N N N 100 
PRD_002404 H7  H7  H 0 1 N N N -9.293  13.051 33.578 9.906   -3.220 -1.124 TRP 1  HE1  polymer 1 1 N N N 101 
PRD_002404 H8  H8  H 0 1 N N N -4.381  12.449 31.522 9.199   -0.157 3.174  TRP 1  HE3  polymer 1 1 N N N 102 
PRD_002404 H9  H9  H 0 1 N N N -8.461  10.365 33.486 7.149   -2.947 -0.356 TRP 1  HZ2  polymer 1 1 N N N 103 
PRD_002404 H10 H10 H 0 1 N N N -4.452  10.039 32.021 6.779   -0.491 3.112  TRP 1  HZ3  polymer 1 1 N N N 104 
PRD_002404 H11 H11 H 0 1 N N N -4.758  14.237 34.955 11.343  3.141  0.364  ASN 2  H    polymer 1 1 Y Y N 105 
PRD_002404 H12 H12 H 0 1 N N N -2.554  12.462 34.076 9.923   3.490  -1.556 ASN 2  HA   polymer 1 1 Y N N 106 
PRD_002404 H13 H13 H 0 1 N N N -1.409  12.634 36.214 9.530   0.466  -1.493 ASN 2  HB2  polymer 1 1 N N N 107 
PRD_002404 H14 H14 H 0 1 N N N -1.520  14.239 35.415 9.128   1.577  -2.825 ASN 2  HB3  polymer 1 1 N N N 108 
PRD_002404 H15 H15 H 0 0 N N N -3.630  15.692 37.835 10.786  -0.343 -3.736 ASN 2  HD21 polymer 1 1 N N N 109 
PRD_002404 H16 H16 H 0 0 N N N -3.020  15.791 36.217 12.387  0.162  -3.798 ASN 2  HD22 polymer 1 1 N N N 110 
PRD_002404 H17 H17 H 0 1 N N N -2.268  10.608 35.529 7.334   2.789  -2.009 SER 3  H    polymer 1 1 Y Y N 111 
PRD_002404 H18 H18 H 0 1 N N N -3.029  8.538  36.049 6.258   2.901  0.771  SER 3  HA   polymer 1 1 Y N N 112 
PRD_002404 H19 H19 H 0 1 N N N -4.174  8.668  38.408 5.000   3.687  -1.897 SER 3  HB2  polymer 1 1 N N N 113 
PRD_002404 H20 H20 H 0 1 N N N -2.435  9.040  38.154 4.171   3.774  -0.324 SER 3  HB3  polymer 1 1 N N N 114 
PRD_002404 H21 H21 H 0 1 N N N -3.181  11.298 38.036 5.214   5.845  -0.896 SER 3  HG   polymer 1 1 N N N 115 
PRD_002404 H22 H22 H 0 1 N N N -4.544  8.727  34.175 6.060   0.611  1.344  ASN 4  H    polymer 1 1 Y Y N 116 
PRD_002404 H23 H23 H 0 1 N N N -7.375  8.872  34.747 4.880   -1.139 -0.683 ASN 4  HA   polymer 1 1 Y N N 117 
PRD_002404 H24 H24 H 0 1 N N N -7.689  8.282  32.410 5.070   -2.860 0.937  ASN 4  HB2  polymer 1 1 N N N 118 
PRD_002404 H25 H25 H 0 0 N N N -5.348  6.904  30.155 5.751   -3.192 3.530  ASN 4  HD21 polymer 1 1 N N N 119 
PRD_002404 H26 H26 H 0 0 N N N -6.938  7.547  30.395 4.741   -2.350 4.575  ASN 4  HD22 polymer 1 1 N N N 120 
PRD_002404 H27 H27 H 0 1 N N N -5.045  6.262  34.932 2.651   -2.189 -0.392 VAL 5  H    polymer 1 1 Y Y N 121 
PRD_002404 H28 H28 H 0 1 N N N -7.171  4.241  34.646 0.845   -0.815 1.446  VAL 5  HA   polymer 1 1 Y N N 122 
PRD_002404 H29 H29 H 0 1 N N N -4.242  3.932  35.410 -0.707  -0.171 -0.442 VAL 5  HB   polymer 1 1 N N N 123 
PRD_002404 H30 H30 H 0 0 N N N -4.637  1.510  35.024 2.059   1.109  -0.579 VAL 5  HG11 polymer 1 1 N N N 124 
PRD_002404 H31 H31 H 0 0 N N N -5.631  2.146  36.378 0.510   1.872  -1.010 VAL 5  HG12 polymer 1 1 N N N 125 
PRD_002404 H32 H32 H 0 0 N N N -6.385  1.841  34.776 0.853   1.448  0.685  VAL 5  HG13 polymer 1 1 N N N 126 
PRD_002404 H33 H33 H 0 0 N N N -4.008  2.995  33.125 0.114   -1.614 -2.206 VAL 5  HG21 polymer 1 1 N N N 127 
PRD_002404 H34 H34 H 0 0 N N N -5.730  3.389  32.795 0.422   0.066  -2.707 VAL 5  HG22 polymer 1 1 N N N 128 
PRD_002404 H35 H35 H 0 0 N N N -4.548  4.708  33.098 1.753   -0.933 -2.073 VAL 5  HG23 polymer 1 1 N N N 129 
PRD_002404 H36 H36 H 0 1 N N N -4.976  5.506  37.232 -1.233  -2.031 1.649  HIS 6  H    polymer 1 1 Y Y N 130 
PRD_002404 H37 H37 H 0 1 N N N -7.228  5.345  39.070 -0.961  -4.798 0.760  HIS 6  HA   polymer 1 1 Y N N 131 
PRD_002404 H38 H38 H 0 1 N N N -6.617  3.065  39.319 -2.764  -5.269 2.234  HIS 6  HB2  polymer 1 1 N N N 132 
PRD_002404 H39 H39 H 0 1 N N N -4.873  3.469  39.455 -1.845  -3.985 3.059  HIS 6  HB3  polymer 1 1 N N N 133 
PRD_002404 H40 H40 H 0 1 N N N -8.121  3.466  41.384 -3.164  -1.747 3.383  HIS 6  HD1  polymer 1 1 N N N 134 
PRD_002404 H41 H41 H 0 1 N N N -4.047  4.371  41.960 -5.109  -4.562 1.101  HIS 6  HD2  polymer 1 1 N N N 135 
PRD_002404 H42 H42 H 0 1 N N N -7.786  3.803  43.879 -5.403  -0.745 2.916  HIS 6  HE1  polymer 1 1 N N N 136 
PRD_002404 H43 H43 H 0 1 N N N -7.209  7.041  40.291 -1.805  -2.165 -1.036 SER 7  H    polymer 1 1 Y Y N 137 
PRD_002404 H44 H44 H 0 1 N N N -4.638  8.282  41.226 -2.815  -2.202 -3.120 SER 7  HA   polymer 1 1 Y N N 138 
PRD_002404 H45 H45 H 0 1 N N N -5.971  9.871  39.935 -3.799  -4.965 -2.316 SER 7  HB2  polymer 1 1 N N N 139 
PRD_002404 H46 H46 H 0 1 N N N -7.467  9.388  40.805 -4.135  -4.180 -3.877 SER 7  HB3  polymer 1 1 N N N 140 
PRD_002404 H47 H47 H 0 1 N N N -6.551  11.347 41.613 -2.162  -5.523 -3.963 SER 7  HG   polymer 1 1 N N N 141 
PRD_002404 H48 H48 H 0 1 N N N -4.438  6.729  42.962 -5.050  -3.432 -0.464 TYR 8  H    polymer 1 1 Y Y N 142 
PRD_002404 H49 H49 H 0 1 N N N -6.811  6.419  44.745 -7.304  -1.942 -1.176 TYR 8  HA   polymer 1 1 Y N N 143 
PRD_002404 H50 H50 H 0 1 N N N -4.340  4.776  44.556 -7.399  -1.420 1.390  TYR 8  HB3  polymer 1 1 N N N 144 
PRD_002404 H51 H51 H 0 1 N N N -7.625  5.006  46.162 -9.120  -2.727 2.285  TYR 8  HD1  polymer 1 1 N N N 145 
PRD_002404 H52 H52 H 0 1 N N N -4.046  2.759  45.707 -6.480  -4.436 -0.597 TYR 8  HD2  polymer 1 1 N N N 146 
PRD_002404 H53 H53 H 0 1 N N N -8.083  3.858  48.291 -10.535 -4.738 2.188  TYR 8  HE1  polymer 1 1 N N N 147 
PRD_002404 H54 H54 H 0 1 N N N -4.582  1.489  47.745 -7.891  -6.451 -0.700 TYR 8  HE2  polymer 1 1 N N N 148 
PRD_002404 H55 H55 H 0 1 N N N -6.041  1.219  49.445 -10.777 -6.795 0.020  TYR 8  HH   polymer 1 1 N N N 149 
PRD_002404 H56 H56 H 0 1 N N N -6.817  7.472  46.604 -7.960  0.353  -0.534 ARG 9  H    polymer 1 1 Y Y N 150 
PRD_002404 H57 H57 H 0 1 N N N -4.201  8.081  47.902 -5.765  2.147  0.169  ARG 9  HA   polymer 1 1 Y N N 151 
PRD_002404 H58 H58 H 0 1 N N N -5.463  9.887  49.137 -7.193  2.297  -2.524 ARG 9  HB2  polymer 1 1 N N N 152 
PRD_002404 H59 H59 H 0 1 N N N -5.199  10.149 47.380 -6.148  3.576  -1.862 ARG 9  HB3  polymer 1 1 N N N 153 
PRD_002404 H60 H60 H 0 1 N N N -7.808  9.000  48.367 -4.254  1.978  -1.760 ARG 9  HG2  polymer 1 1 N N N 154 
PRD_002404 H61 H61 H 0 1 N N N -7.484  10.761 48.504 -5.299  0.698  -2.422 ARG 9  HG3  polymer 1 1 N N N 155 
PRD_002404 H62 H62 H 0 1 N N N -6.913  10.581 45.942 -5.651  2.046  -4.474 ARG 9  HD2  polymer 1 1 N N N 156 
PRD_002404 H63 H63 H 0 1 N N N -7.855  9.054  46.030 -4.606  3.326  -3.812 ARG 9  HD3  polymer 1 1 N N N 157 
PRD_002404 H64 H64 H 0 1 N N N -9.248  11.304 47.208 -3.166  0.896  -3.780 ARG 9  HE   polymer 1 1 N N N 158 
PRD_002404 H65 H65 H 0 0 N N N -11.406 11.678 44.508 -4.552  3.185  -6.018 ARG 9  HH11 polymer 1 1 N N N 159 
PRD_002404 H66 H66 H 0 0 N N N -11.092 12.112 46.155 -3.439  2.912  -7.246 ARG 9  HH12 polymer 1 1 N N N 160 
PRD_002404 H67 H67 H 0 0 N N N -9.967  10.309 43.378 -1.745  1.374  -6.946 ARG 9  HH21 polymer 1 1 N N N 161 
PRD_002404 H68 H68 H 0 0 N N N -8.550  9.693  44.160 -1.625  0.528  -5.500 ARG 9  HH22 polymer 1 1 N N N 162 
PRD_002404 H69 H69 H 0 1 N N N -3.851  7.494  50.021 -6.847  4.607  -0.033 PHE 10 H    polymer 1 1 Y Y N 163 
PRD_002404 H70 H70 H 0 1 N N N -6.022  6.093  51.475 -9.281  4.369  1.563  PHE 10 HA   polymer 1 1 Y N N 164 
PRD_002404 H71 H71 H 0 1 N N N -4.343  4.204  51.954 -7.642  6.779  0.660  PHE 10 HB2  polymer 1 1 N N N 165 
PRD_002404 H72 H72 H 0 1 N N N -5.162  4.243  50.356 -9.056  6.865  1.738  PHE 10 HB3  polymer 1 1 N N N 166 
PRD_002404 H73 H73 H 0 1 N N N -1.948  4.706  52.119 -5.567  5.767  1.410  PHE 10 HD1  polymer 1 1 N N N 167 
PRD_002404 H74 H74 H 0 1 N N N -3.897  4.676  48.336 -8.951  5.985  3.996  PHE 10 HD2  polymer 1 1 N N N 168 
PRD_002404 H75 H75 H 0 1 N N N 0.236   4.588  50.984 -4.132  5.218  3.334  PHE 10 HE1  polymer 1 1 N N N 169 
PRD_002404 H76 H76 H 0 1 N N N -1.713  4.434  47.223 -7.516  5.436  5.920  PHE 10 HE2  polymer 1 1 N N N 170 
PRD_002404 H77 H77 H 0 1 N N N 0.347   4.507  48.540 -5.107  5.048  5.589  PHE 10 HZ   polymer 1 1 N N N 171 
PRD_002404 H78 H78 H 0 1 N Y N -4.050  6.580  54.384 -11.441 6.200  -0.767 PHE 10 HXT  polymer 1 1 Y N Y 172 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
PRD_002404 N1  C1  SING N N 1   
PRD_002404 N1  H1  SING N N 2   
PRD_002404 N1  H2  SING N N 3   
PRD_002404 C1  C2  SING N N 4   
PRD_002404 C1  C3  SING N N 5   
PRD_002404 C1  H3  SING N N 6   
PRD_002404 C2  O1  DOUB N N 7   
PRD_002404 C3  C4  SING N N 8   
PRD_002404 C3  H4  SING N N 9   
PRD_002404 C3  H5  SING N N 10  
PRD_002404 C4  C5  DOUB Y N 11  
PRD_002404 C4  C6  SING Y N 12  
PRD_002404 C5  N2  SING Y N 13  
PRD_002404 C5  H6  SING N N 14  
PRD_002404 C6  C7  DOUB Y N 15  
PRD_002404 C6  C8  SING Y N 16  
PRD_002404 N2  C7  SING Y N 17  
PRD_002404 N2  H7  SING N N 18  
PRD_002404 C7  C9  SING Y N 19  
PRD_002404 C8  C10 DOUB Y N 20  
PRD_002404 C8  H8  SING N N 21  
PRD_002404 C9  C11 DOUB Y N 22  
PRD_002404 C9  H9  SING N N 23  
PRD_002404 C10 C11 SING Y N 24  
PRD_002404 C10 H10 SING N N 25  
PRD_002404 N3  C12 SING N N 26  
PRD_002404 N3  H11 SING N N 27  
PRD_002404 C12 C13 SING N N 28  
PRD_002404 C12 C14 SING N N 29  
PRD_002404 C12 H12 SING N N 30  
PRD_002404 C13 O2  DOUB N N 31  
PRD_002404 C14 C15 SING N N 32  
PRD_002404 C14 H13 SING N N 33  
PRD_002404 C14 H14 SING N N 34  
PRD_002404 C15 O3  DOUB N N 35  
PRD_002404 C15 N4  SING N N 36  
PRD_002404 N4  H15 SING N N 37  
PRD_002404 N4  H16 SING N N 38  
PRD_002404 N5  C16 SING N N 39  
PRD_002404 N5  H17 SING N N 40  
PRD_002404 C16 C17 SING N N 41  
PRD_002404 C16 C18 SING N N 42  
PRD_002404 C16 H18 SING N N 43  
PRD_002404 C17 O4  DOUB N N 44  
PRD_002404 C18 O5  SING N N 45  
PRD_002404 C18 H19 SING N N 46  
PRD_002404 C18 H20 SING N N 47  
PRD_002404 O5  H21 SING N N 48  
PRD_002404 N6  C19 SING N N 49  
PRD_002404 N6  H22 SING N N 50  
PRD_002404 C19 C20 SING N N 51  
PRD_002404 C19 C21 SING N N 52  
PRD_002404 C19 H23 SING N N 53  
PRD_002404 C20 O6  DOUB N N 54  
PRD_002404 C21 C22 SING N N 55  
PRD_002404 C21 H24 SING N N 56  
PRD_002404 C22 O7  DOUB N N 57  
PRD_002404 C22 N7  SING N N 58  
PRD_002404 N7  H25 SING N N 59  
PRD_002404 N7  H26 SING N N 60  
PRD_002404 N8  C23 SING N N 61  
PRD_002404 N8  H27 SING N N 62  
PRD_002404 C23 C24 SING N N 63  
PRD_002404 C23 C25 SING N N 64  
PRD_002404 C23 H28 SING N N 65  
PRD_002404 C24 O8  DOUB N N 66  
PRD_002404 C25 C26 SING N N 67  
PRD_002404 C25 C27 SING N N 68  
PRD_002404 C25 H29 SING N N 69  
PRD_002404 C26 H30 SING N N 70  
PRD_002404 C26 H31 SING N N 71  
PRD_002404 C26 H32 SING N N 72  
PRD_002404 C27 H33 SING N N 73  
PRD_002404 C27 H34 SING N N 74  
PRD_002404 C27 H35 SING N N 75  
PRD_002404 N9  C28 SING N N 76  
PRD_002404 N9  H36 SING N N 77  
PRD_002404 C28 C29 SING N N 78  
PRD_002404 C28 C30 SING N N 79  
PRD_002404 C28 H37 SING N N 80  
PRD_002404 C29 O9  DOUB N N 81  
PRD_002404 C30 C31 SING N N 82  
PRD_002404 C30 H38 SING N N 83  
PRD_002404 C30 H39 SING N N 84  
PRD_002404 C31 N10 SING Y N 85  
PRD_002404 C31 C32 DOUB Y N 86  
PRD_002404 N10 C33 DOUB Y N 87  
PRD_002404 N10 H40 SING N N 88  
PRD_002404 C32 N11 SING Y N 89  
PRD_002404 C32 H41 SING N N 90  
PRD_002404 C33 N11 SING Y N 91  
PRD_002404 C33 H42 SING N N 92  
PRD_002404 N12 C34 SING N N 93  
PRD_002404 N12 H43 SING N N 94  
PRD_002404 C34 C35 SING N N 95  
PRD_002404 C34 C36 SING N N 96  
PRD_002404 C34 H44 SING N N 97  
PRD_002404 C35 O10 DOUB N N 98  
PRD_002404 C36 O11 SING N N 99  
PRD_002404 C36 H45 SING N N 100 
PRD_002404 C36 H46 SING N N 101 
PRD_002404 O11 H47 SING N N 102 
PRD_002404 N13 C37 SING N N 103 
PRD_002404 N13 H48 SING N N 104 
PRD_002404 C37 C38 SING N N 105 
PRD_002404 C37 C39 SING N N 106 
PRD_002404 C37 H49 SING N N 107 
PRD_002404 C38 O12 DOUB N N 108 
PRD_002404 C39 C40 SING N N 109 
PRD_002404 C39 H50 SING N N 110 
PRD_002404 C40 C41 DOUB Y N 111 
PRD_002404 C40 C42 SING Y N 112 
PRD_002404 C41 C43 SING Y N 113 
PRD_002404 C41 H51 SING N N 114 
PRD_002404 C42 C44 DOUB Y N 115 
PRD_002404 C42 H52 SING N N 116 
PRD_002404 C43 C45 DOUB Y N 117 
PRD_002404 C43 H53 SING N N 118 
PRD_002404 C44 C45 SING Y N 119 
PRD_002404 C44 H54 SING N N 120 
PRD_002404 C45 O13 SING N N 121 
PRD_002404 O13 H55 SING N N 122 
PRD_002404 N14 C46 SING N N 123 
PRD_002404 N14 H56 SING N N 124 
PRD_002404 C46 C47 SING N N 125 
PRD_002404 C46 C48 SING N N 126 
PRD_002404 C46 H57 SING N N 127 
PRD_002404 C47 O14 DOUB N N 128 
PRD_002404 C48 C49 SING N N 129 
PRD_002404 C48 H58 SING N N 130 
PRD_002404 C48 H59 SING N N 131 
PRD_002404 C49 C50 SING N N 132 
PRD_002404 C49 H60 SING N N 133 
PRD_002404 C49 H61 SING N N 134 
PRD_002404 C50 N15 SING N N 135 
PRD_002404 C50 H62 SING N N 136 
PRD_002404 C50 H63 SING N N 137 
PRD_002404 N15 C51 SING N N 138 
PRD_002404 N15 H64 SING N N 139 
PRD_002404 C51 N16 SING N N 140 
PRD_002404 C51 N17 DOUB N N 141 
PRD_002404 N16 H65 SING N N 142 
PRD_002404 N16 H66 SING N N 143 
PRD_002404 N17 H67 SING N N 144 
PRD_002404 N17 H68 SING N N 145 
PRD_002404 N18 C52 SING N N 146 
PRD_002404 N18 H69 SING N N 147 
PRD_002404 C52 C53 SING N N 148 
PRD_002404 C52 C54 SING N N 149 
PRD_002404 C52 H70 SING N N 150 
PRD_002404 C53 O15 DOUB N N 151 
PRD_002404 C53 O16 SING N N 152 
PRD_002404 C54 C55 SING N N 153 
PRD_002404 C54 H71 SING N N 154 
PRD_002404 C54 H72 SING N N 155 
PRD_002404 C55 C56 DOUB Y N 156 
PRD_002404 C55 C57 SING Y N 157 
PRD_002404 C56 C58 SING Y N 158 
PRD_002404 C56 H73 SING N N 159 
PRD_002404 C57 C59 DOUB Y N 160 
PRD_002404 C57 H74 SING N N 161 
PRD_002404 C58 C60 DOUB Y N 162 
PRD_002404 C58 H75 SING N N 163 
PRD_002404 C59 C60 SING Y N 164 
PRD_002404 C59 H76 SING N N 165 
PRD_002404 C60 H77 SING N N 166 
PRD_002404 O16 H78 SING N N 167 
PRD_002404 C2  N3  SING N N 168 
PRD_002404 C11 C21 SING N N 169 
PRD_002404 C13 N5  SING N N 170 
PRD_002404 C17 N6  SING N N 171 
PRD_002404 C20 N8  SING N N 172 
PRD_002404 C24 N9  SING N N 173 
PRD_002404 C29 N12 SING N N 174 
PRD_002404 N11 C39 SING N N 175 
PRD_002404 C35 N13 SING N N 176 
PRD_002404 C38 N14 SING N N 177 
PRD_002404 C47 N18 SING N N 178 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
PRD_002404 InChI            InChI                1.06  "InChI=1S/C60H76N18O16/c1-27(2)45(75-57(91)46-44(49(63)83)30-12-15-34-31(22-67-37(34)19-30)18-35(61)50(84)70-39(21-43(62)82)53(87)74-41(24-79)54(88)76-46)56(90)71-38-20-32-23-78(26-68-32)48(29-10-13-33(81)14-11-29)47(77-55(89)42(25-80)73-52(38)86)58(92)69-36(9-6-16-66-60(64)65)51(85)72-40(59(93)94)17-28-7-4-3-5-8-28/h3-5,7-8,10-15,19,22-23,26-27,35-36,38-42,44-48,67,79-81H,6,9,16-18,20-21,24-25,61H2,1-2H3,(H2,62,82)(H2,63,83)(H,69,92)(H,70,84)(H,71,90)(H,72,85)(H,73,86)(H,74,87)(H,75,91)(H,76,88)(H,77,89)(H,93,94)(H4,64,65,66)/p+2/t35-,36-,38-,39-,40-,41-,42-,44+,45-,46-,47-,48+/m0/s1" 
PRD_002404 InChIKey         InChI                1.06  HWDDFJOGMWPPAS-GANBONKGSA-P                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
PRD_002404 SMILES_CANONICAL CACTVS               3.385 "CC(C)[C@H](NC(=O)[C@H]1NC(=O)[C@H](CO)NC(=O)[C@H](CC(N)=O)NC(=O)[C@@H](N)Cc2c[nH]c3cc(ccc23)[C@H]1C(N)=O)C(=O)N[C@H]4Cc5cn(c[nH+]5)[C@@H]([C@H](NC(=O)[C@H](CO)NC4=O)C(=O)N[C@@H](CCCNC(N)=[NH2+])C(=O)N[C@@H](Cc6ccccc6)C(O)=O)c7ccc(O)cc7"                                                                                                                                                                                                                                                                                                                                                                    
PRD_002404 SMILES           CACTVS               3.385 "CC(C)[CH](NC(=O)[CH]1NC(=O)[CH](CO)NC(=O)[CH](CC(N)=O)NC(=O)[CH](N)Cc2c[nH]c3cc(ccc23)[CH]1C(N)=O)C(=O)N[CH]4Cc5cn(c[nH+]5)[CH]([CH](NC(=O)[CH](CO)NC4=O)C(=O)N[CH](CCCNC(N)=[NH2+])C(=O)N[CH](Cc6ccccc6)C(O)=O)c7ccc(O)cc7"                                                                                                                                                                                                                                                                                                                                                                                    
PRD_002404 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)[C@@H](C(=O)N[C@H]1Cc2cn(c[nH+]2)C([C@H](NC(=O)[C@@H](NC1=O)CO)C(=O)N[C@@H](CCCNC(=[NH2+])N)C(=O)N[C@@H](Cc3ccccc3)C(=O)O)c4ccc(cc4)O)NC(=O)[C@@H]5C(c6ccc7c(c6)[nH]cc7C[C@@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)N5)CO)CC(=O)N)N)C(=O)N"                                                                                                                                                                                                                                                                                                                                                                        
PRD_002404 SMILES           "OpenEye OEToolkits" 2.0.7 "CC(C)C(C(=O)NC1Cc2cn(c[nH+]2)C(C(NC(=O)C(NC1=O)CO)C(=O)NC(CCCNC(=[NH2+])N)C(=O)NC(Cc3ccccc3)C(=O)O)c4ccc(cc4)O)NC(=O)C5C(c6ccc7c(c6)[nH]cc7CC(C(=O)NC(C(=O)NC(C(=O)N5)CO)CC(=O)N)N)C(=O)N"                                                                                                                                                                                                                                                                                                                                                                                                                      
# 
_pdbx_chem_comp_identifier.comp_id           PRD_002404 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   3.1.0.0 
_pdbx_chem_comp_identifier.identifier        "[[[(4~{S})-4-[[(3~{S},6~{S},9~{S})-9-[[(2~{S})-2-[[(6~{S},9~{S},12~{S},15~{S})-16-aminocarbonyl-6-azanyl-9-(2-azanyl-2-oxidanylidene-ethyl)-12-(hydroxymethyl)-7,10,13-tris(oxidanylidene)-2,8,11,14-tetrazatricyclo[15.3.1.0^{4,20}]henicosa-1(20),3,17(21),18-tetraen-15-yl]carbonylamino]-3-methyl-butanoyl]amino]-6-(hydroxymethyl)-2-(4-hydroxyphenyl)-5,8-bis(oxidanylidene)-1,4,7-triaza-12-azoniabicyclo[9.2.1]tetradeca-11(14),12-dien-3-yl]carbonylamino]-5-oxidanylidene-5-[[(2~{S})-1-oxidanyl-1-oxidanylidene-3-phenyl-propan-2-yl]amino]pentyl]amino]-azanyl-methylidene]azanium" 
# 
