data_PRD_002111
# 
_pdbx_reference_molecule.prd_id                       PRD_002111 
_pdbx_reference_molecule.name                         ADEP-2B5Me 
_pdbx_reference_molecule.represent_as                 polymer 
_pdbx_reference_molecule.type                         "Cyclic depsipeptide" 
_pdbx_reference_molecule.type_evidence_code           ? 
_pdbx_reference_molecule.class                        Antibiotic 
_pdbx_reference_molecule.class_evidence_code          ? 
_pdbx_reference_molecule.formula                      "C41 H56 F2 N6 O8" 
_pdbx_reference_molecule.formula_weight               798.916 
_pdbx_reference_molecule.chem_comp_id                 ? 
_pdbx_reference_molecule.release_status               REL 
_pdbx_reference_molecule.replaces                     ? 
_pdbx_reference_molecule.replaced_by                  ? 
_pdbx_reference_molecule.compound_details             ? 
_pdbx_reference_molecule.description                  ? 
_pdbx_reference_molecule.representative_PDB_id_code   4U0G 
# 
loop_
_pdbx_reference_entity_list.prd_id 
_pdbx_reference_entity_list.ref_entity_id 
_pdbx_reference_entity_list.component_id 
_pdbx_reference_entity_list.type 
_pdbx_reference_entity_list.details 
PRD_002111 1 1 polymer     .   
PRD_002111 2 2 non-polymer 39Y 
# 
_pdbx_reference_entity_nonpoly.prd_id          PRD_002111 
_pdbx_reference_entity_nonpoly.ref_entity_id   2 
_pdbx_reference_entity_nonpoly.name            "(2E,5S)-5-methylhept-2-enoic acid" 
_pdbx_reference_entity_nonpoly.chem_comp_id    39Y 
_pdbx_reference_entity_nonpoly.details         . 
# 
_pdbx_reference_entity_link.prd_id              PRD_002111 
_pdbx_reference_entity_link.link_id             1 
_pdbx_reference_entity_link.link_class          PN 
_pdbx_reference_entity_link.ref_entity_id_1     1 
_pdbx_reference_entity_link.entity_seq_num_1    1 
_pdbx_reference_entity_link.comp_id_1           WFP 
_pdbx_reference_entity_link.atom_id_1           N 
_pdbx_reference_entity_link.ref_entity_id_2     2 
_pdbx_reference_entity_link.entity_seq_num_2    . 
_pdbx_reference_entity_link.comp_id_2           39Y 
_pdbx_reference_entity_link.atom_id_2           C8 
_pdbx_reference_entity_link.value_order         sing 
_pdbx_reference_entity_link.component_1         1 
_pdbx_reference_entity_link.component_2         2 
_pdbx_reference_entity_link.details             . 
_pdbx_reference_entity_link.nonpoly_res_num_1   . 
_pdbx_reference_entity_link.nonpoly_res_num_2   . 
# 
loop_
_pdbx_reference_entity_poly_link.prd_id 
_pdbx_reference_entity_poly_link.ref_entity_id 
_pdbx_reference_entity_poly_link.link_id 
_pdbx_reference_entity_poly_link.atom_id_1 
_pdbx_reference_entity_poly_link.comp_id_1 
_pdbx_reference_entity_poly_link.entity_seq_num_1 
_pdbx_reference_entity_poly_link.atom_id_2 
_pdbx_reference_entity_poly_link.comp_id_2 
_pdbx_reference_entity_poly_link.entity_seq_num_2 
_pdbx_reference_entity_poly_link.value_order 
_pdbx_reference_entity_poly_link.component_id 
_pdbx_reference_entity_poly_link.details 
_pdbx_reference_entity_poly_link.insert_code_1 
_pdbx_reference_entity_poly_link.insert_code_2 
PRD_002111 1 1 C   WFP 1 N THR 2 sing 1 . . . 
PRD_002111 1 2 C   THR 2 N PRO 3 sing 1 . . . 
PRD_002111 1 3 OG1 THR 2 C PRO 6 sing 1 . . . 
PRD_002111 1 4 C   PRO 3 N 3A0 4 sing 1 . . . 
PRD_002111 1 5 C   3A0 4 N ALA 5 sing 1 . . . 
PRD_002111 1 6 C   ALA 5 N PRO 6 sing 1 . . . 
# 
_pdbx_reference_entity_poly.prd_id          PRD_002111 
_pdbx_reference_entity_poly.ref_entity_id   1 
_pdbx_reference_entity_poly.db_code         . 
_pdbx_reference_entity_poly.db_name         . 
_pdbx_reference_entity_poly.type            peptide-like 
# 
_pdbx_reference_entity_sequence.prd_id          PRD_002111 
_pdbx_reference_entity_sequence.ref_entity_id   1 
_pdbx_reference_entity_sequence.type            peptide-like 
_pdbx_reference_entity_sequence.NRP_flag        N 
# 
loop_
_pdbx_reference_entity_poly_seq.prd_id 
_pdbx_reference_entity_poly_seq.ref_entity_id 
_pdbx_reference_entity_poly_seq.num 
_pdbx_reference_entity_poly_seq.mon_id 
_pdbx_reference_entity_poly_seq.parent_mon_id 
_pdbx_reference_entity_poly_seq.hetero 
_pdbx_reference_entity_poly_seq.observed 
PRD_002111 1 1 WFP PHE N Y 
PRD_002111 1 2 THR THR N Y 
PRD_002111 1 3 PRO PRO N Y 
PRD_002111 1 4 3A0 .   N Y 
PRD_002111 1 5 ALA ALA N Y 
PRD_002111 1 6 PRO PRO N Y 
# 
loop_
_pdbx_prd_audit.prd_id 
_pdbx_prd_audit.date 
_pdbx_prd_audit.processing_site 
_pdbx_prd_audit.action_type 
PRD_002111 2014-07-18 RCSB "Create molecule"    
PRD_002111 2014-10-08 RCSB "Initial release"    
PRD_002111 2023-11-03 PDBE "Other modification" 
PRD_002111 2024-12-19 RCSB "Other modification" 
# 
