data_PRD_000760
# 
_pdbx_reference_molecule.prd_id                       PRD_000760 
_pdbx_reference_molecule.name                         "THIOPEPTIDE THIOSTREPTON OXIDIZED AT CA-CB BOND OF RESIDUE 9" 
_pdbx_reference_molecule.represent_as                 polymer 
_pdbx_reference_molecule.type                         Thiopeptide 
_pdbx_reference_molecule.type_evidence_code           ? 
_pdbx_reference_molecule.class                        Antibiotic 
_pdbx_reference_molecule.class_evidence_code          ? 
_pdbx_reference_molecule.formula                      "C69 H79 N18 O17 S5" 
_pdbx_reference_molecule.formula_weight               1592.801 
_pdbx_reference_molecule.chem_comp_id                 ? 
_pdbx_reference_molecule.release_status               REL 
_pdbx_reference_molecule.replaces                     ? 
_pdbx_reference_molecule.replaced_by                  ? 
_pdbx_reference_molecule.compound_details             
;THIOSTREPTON IS A MEMBER OF A SULPHUR-RICH HETEROCYCLIC PEPTIDES
CLASS. ALL SHARE A MACROCYCLIC CORE, CONSISTING OF A
NITROGEN CONTAINING, SIX-MEMBERED RING CENTRAL TO DEHYDROAMINO
ACIDS AND A SUBSET OF FIVE MEMBER RING STRUCTURES INCLUDING
THIAZOLES, THIAZOLINES AND OXAZOLES.
HERE, THIOSTREPTON IS REPRESENTED BY THE SEQUENCE (SEQRES)
;
_pdbx_reference_molecule.description                  
;THIOSTREPTON IS A HETEROCYCLIC THIOPEPTIDE,
CONSISTING OF FOUR THIAZOLES ONE THIOZOLINE
ONE PIPERIDEINE RINGS.
A MODIFIED QUINOLINE LINKED TO MAIN-CHAIN
RESIDUE 1 AND SIDE-CHAIN OF RESIDUE 12.
IN THIS ENTRY RESIDUE 9 WAS CHEMICALLY MODIFIED: THE
CA-CB BOND WAS OXIDIZED FROM SINGLE TO DOUBLE.
RESIDUE 17 (HET DHA) WAS DELETED.
;
_pdbx_reference_molecule.representative_PDB_id_code   2l2x 
# 
_pdbx_reference_entity_list.prd_id          PRD_000760 
_pdbx_reference_entity_list.ref_entity_id   1 
_pdbx_reference_entity_list.component_id    1 
_pdbx_reference_entity_list.type            polymer 
_pdbx_reference_entity_list.details         "THIOPEPTIDE THIOSTREPTON OXIDIZED AT CA-CB BOND OF RESIDUE 9" 
# 
loop_
_pdbx_reference_entity_poly_link.prd_id 
_pdbx_reference_entity_poly_link.ref_entity_id 
_pdbx_reference_entity_poly_link.link_id 
_pdbx_reference_entity_poly_link.atom_id_1 
_pdbx_reference_entity_poly_link.comp_id_1 
_pdbx_reference_entity_poly_link.entity_seq_num_1 
_pdbx_reference_entity_poly_link.atom_id_2 
_pdbx_reference_entity_poly_link.comp_id_2 
_pdbx_reference_entity_poly_link.entity_seq_num_2 
_pdbx_reference_entity_poly_link.value_order 
_pdbx_reference_entity_poly_link.component_id 
_pdbx_reference_entity_poly_link.details 
_pdbx_reference_entity_poly_link.insert_code_1 
_pdbx_reference_entity_poly_link.insert_code_2 
PRD_000760 1 1  C11 QUA 1  OG1 THR 13 sing 1 ? ? ? 
PRD_000760 1 2  C7  QUA 1  N   ILE 2  sing 1 ? ? ? 
PRD_000760 1 3  C   ILE 2  N   ALA 3  sing 1 ? ? ? 
PRD_000760 1 4  C   ALA 3  N   DHA 4  sing 1 ? ? ? 
PRD_000760 1 5  C   DHA 4  N   ALA 5  sing 1 ? ? ? 
PRD_000760 1 6  C   ALA 5  N   SER 6  sing 1 ? ? ? 
PRD_000760 1 7  CB  SER 6  CB  MH6 15 sing 1 ? ? ? 
PRD_000760 1 8  C   SER 6  N   BB9 7  doub 1 ? ? ? 
PRD_000760 1 9  C   SER 6  SG  BB9 7  sing 1 ? ? ? 
PRD_000760 1 10 CA  SER 6  C   BB9 14 sing 1 ? ? ? 
PRD_000760 1 11 C   BB9 7  N   THR 8  sing 1 ? ? ? 
PRD_000760 1 12 C   THR 8  N   DBU 9  sing 1 ? ? ? 
PRD_000760 1 13 C   DBU 9  SG  BB9 10 sing 1 ? ? ? 
PRD_000760 1 14 C   DBU 9  N   BB9 10 doub 1 ? ? ? 
PRD_000760 1 15 C   BB9 10 N   TS9 11 sing 1 ? ? ? 
PRD_000760 1 16 C   TS9 11 SG  BB9 12 sing 1 ? ? ? 
PRD_000760 1 17 C   TS9 11 N   BB9 12 doub 1 ? ? ? 
PRD_000760 1 18 C   BB9 12 N   THR 13 sing 1 ? ? ? 
PRD_000760 1 19 C   THR 13 SG  BB9 14 sing 1 ? ? ? 
PRD_000760 1 20 C   THR 13 N   BB9 14 doub 1 ? ? ? 
PRD_000760 1 21 C   BB9 14 N   MH6 15 sing 1 ? ? ? 
PRD_000760 1 22 C   MH6 15 SG  BB9 16 sing 1 ? ? ? 
PRD_000760 1 23 C   MH6 15 N   BB9 16 doub 1 ? ? ? 
PRD_000760 1 24 C   BB9 16 N   DHA 17 sing 1 ? ? ? 
PRD_000760 1 25 C   DHA 17 N   NH2 18 sing 1 ? ? ? 
# 
_pdbx_reference_entity_poly.prd_id          PRD_000760 
_pdbx_reference_entity_poly.ref_entity_id   1 
_pdbx_reference_entity_poly.db_code         P0C8P8 
_pdbx_reference_entity_poly.db_name         UNP 
_pdbx_reference_entity_poly.type            peptide-like 
# 
_pdbx_reference_entity_sequence.prd_id          PRD_000760 
_pdbx_reference_entity_sequence.ref_entity_id   1 
_pdbx_reference_entity_sequence.type            peptide-like 
_pdbx_reference_entity_sequence.NRP_flag        N 
# 
loop_
_pdbx_reference_entity_poly_seq.prd_id 
_pdbx_reference_entity_poly_seq.ref_entity_id 
_pdbx_reference_entity_poly_seq.num 
_pdbx_reference_entity_poly_seq.mon_id 
_pdbx_reference_entity_poly_seq.parent_mon_id 
_pdbx_reference_entity_poly_seq.hetero 
_pdbx_reference_entity_poly_seq.observed 
PRD_000760 1 1  QUA ?   N Y 
PRD_000760 1 2  ILE ILE N Y 
PRD_000760 1 3  ALA ALA N Y 
PRD_000760 1 4  DHA SER N Y 
PRD_000760 1 5  ALA ALA N Y 
PRD_000760 1 6  SER SER N Y 
PRD_000760 1 7  BB9 CYS N Y 
PRD_000760 1 8  THR THR N Y 
PRD_000760 1 9  DBU THR N Y 
PRD_000760 1 10 BB9 CYS N Y 
PRD_000760 1 11 TS9 ILE N Y 
PRD_000760 1 12 BB9 CYS N Y 
PRD_000760 1 13 THR THR N Y 
PRD_000760 1 14 BB9 CYS N Y 
PRD_000760 1 15 MH6 SER N Y 
PRD_000760 1 16 BB9 CYS N Y 
PRD_000760 1 17 DHA SER N Y 
PRD_000760 1 18 NH2 ?   N Y 
# 
_pdbx_reference_entity_src_nat.prd_id                PRD_000760 
_pdbx_reference_entity_src_nat.ref_entity_id         1 
_pdbx_reference_entity_src_nat.ordinal               1 
_pdbx_reference_entity_src_nat.taxid                 146537 
_pdbx_reference_entity_src_nat.organism_scientific   "Streptomyces azureus MST-AS4632" 
_pdbx_reference_entity_src_nat.source                ? 
_pdbx_reference_entity_src_nat.db_code               P0C8P8 
_pdbx_reference_entity_src_nat.db_name               UniProtKB 
_pdbx_reference_entity_src_nat.strain                ? 
# 
loop_
_pdbx_prd_audit.prd_id 
_pdbx_prd_audit.date 
_pdbx_prd_audit.processing_site 
_pdbx_prd_audit.action_type 
PRD_000760 2012-02-08 RCSB "Create molecule"    
PRD_000760 2012-07-09 PDBE "Other modification" 
PRD_000760 2012-07-31 RCSB "Other modification" 
PRD_000760 2012-12-12 RCSB "Initial release"    
PRD_000760 2013-06-03 RCSB "Other modification" 
PRD_000760 2017-05-04 RCSB "Other modification" 
PRD_000760 2023-09-20 PDBE "Modify audit"       
# 
